RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 AP4S1Q9Y587 144 aa13.78□□□□□ -0.2
TNFRSF1A-204ENST00000440083 TRBV5-3A0A0A0MS03 114 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PRSS51A0A1B0GVH4 220 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 DHRS12A0PJE2 317 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 HAT1O14929 419 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CTSVO60911 334 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 GBAP04062 536 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 GPIP06744 558 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FGF5P12034 268 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 IL10P22301 178 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 MAPK12P53778 367 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TAS2R50P59544 299 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PHC1P78364 1004 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CLN3Q13286 438 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ST3GAL2Q16842 350 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 GRAMD1BQ3KR37 738 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TMEM35AQ53FP2 167 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 MTX3Q5HYI7 312 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TMEM164Q5U3C3 297 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 IRAK1BP1Q5VVH5 260 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SPPL2CQ8IUH8 684 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TMEM126BQ8IUX1 230 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 MSRB3Q8IXL7 192 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 DNAJC22Q8N4W6 341 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TCTN2Q96GX1 697 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 F2RL3Q96RI0 385 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ASPSCR1Q9BZE9 553 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 KLHL4Q9C0H6 718 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SPRTNQ9H040 489 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SERHLQ9NQF3 203 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SLC25A37Q9NYZ2 338 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 VPS4AQ9UN37 437 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PCDHGB4Q9UN71 923 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 AURKCQ9UQB9 309 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PCDHB14Q9Y5E9 798 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CELSR3Q9NYQ7 3312 aa13.77□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ELOVL7A1L3X0 281 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PLPP1O14494 284 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CASQ2O14958 399 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 STK17BO94768 372 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 GSNP06396 782 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 IL3P08700 152 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 LAMP1P11279 417 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PIM1P11309 404 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 NCK1P16333 377 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PPIBP23284 216 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SOX11P35716 441 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 AHRP35869 848 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 BCL6P41182 706 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CDKN2CP42773 168 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SSR2P43308 183 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 POLE2P56282 527 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 WNT3P56703 355 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 OR4D2P58180 307 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TGM3Q08188 693 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 IL11RAQ14626 422 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TBCELQ5QJ74 424 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FAM71E1Q6IPT2 247 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZNF621Q6ZSS3 439 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TIPARPQ7Z3E1 657 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 VASH2Q86V25 355 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PPP1R3BQ86XI6 285 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PLD3Q8IV08 490 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 MFSD9Q8NBP5 474 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 GALNT6Q8NCL4 622 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 TRPV3Q8NET8 790 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 OR4A15Q8NGL6 344 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 OR10A6Q8NH74 314 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 KCNE4Q8WWG9 221 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 COQ8BQ96D53 544 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CCDC115Q96NT0 180 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ULBP3Q9BZM4 244 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 SPRY4Q9C004 299 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 VCXQ9H320 206 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ZNF282Q9UDV7 671 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ANAPC2Q9UJX6 822 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ADAM29Q9UKF5 820 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ACSL6Q9UKU0 697 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 CORO2BQ9UQ03 480 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 WBP11Q9Y2W2 641 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 DTNAQ9Y4J8 743 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ITPR1Q14643 2758 aa13.76□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PTPRQQ9UMZ3 2332 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 MDC1Q14676 2089 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 A0A0J9YVX5 310 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 OR2A25A4D2G3 310 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 GABRR3A8MPY1 467 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 RNASET2O00584 256 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 DLGAP3O95886 979 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 STATHP02808 62 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 NTRK1P04629 796 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FURINP09958 794 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 UMPSP11172 480 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 FCGR1AP12314 374 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ACADSP16219 412 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 GGT1P19440 569 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 ITPKBP27987 946 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 PEX2P28328 305 aa13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 EIF2S3P41091 472 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-204ENST00000440083 RPS15AP62244 130 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms