RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SUSD1Q6UWL2 747 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 C11orf96Q7Z7L8 435 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PRSS58Q8IYP2 241 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ZNF786Q8N393 782 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 LIX1Q8N485 282 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 DRAXINQ8NBI3 349 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 GOT1L1Q8NHS2 421 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 MIPOL1Q8TD10 442 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 NAT6Q93015 286 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 BORCS5Q969J3 196 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 TMBIM1Q969X1 311 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 NMD3Q96D46 503 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 C11orf24Q96F05 449 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PYURFQ96I23 114 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 FCRL4Q96PJ5 515 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 DEPDC7Q96QD5 511 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 OR52E6Q96RD3 313 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 MAP3K3Q99759 626 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 CMKLR1Q99788 373 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 C1orf50Q9BV19 199 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SLC7A5P2Q9GIP4 190 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 TRIT1Q9H3H1 467 aaKnown RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 ACTR8Q9H981 624 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 AKIRIN1Q9H9L7 192 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 CXorf21Q9HAI6 301 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 SERHLQ9NQF3 203 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 EGFL7Q9UHF1 273 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PTGDR2Q9Y5Y4 395 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 PCNX1Q96RV3 2341 aa4.53□□□□□ -1.68
EDEM3-203ENST00000439962 MAP1AP78559 2803 aaPredicted RBP4.53□□□□□ -1.68
EDEM3-203ENST00000439962 IGHV1OR21-1A0A087WYE8 117 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 IGHV5-10-1A0A0J9YXX1 117 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SH3PXD2BA1X283 911 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ARRDC5A6NEK1 342 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ISM1B1AKI9 464 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FOXE1O00358 373 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 TNFRSF10CO14798 259 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FFAR3O14843 346 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 GPR42O15529 346 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 TBX19O60806 448 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SEC22BO75396 215 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CREG1O75629 220 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 OR6B1O95007 311 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 EIF2S1P05198 315 aaKnown RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CDK4P11802 303 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CRHBPP24387 322 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PSMB5P28074 263 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PTPN6P29350 595 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PIK3CBP42338 1070 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 BDKRB1P46663 353 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 HTR6P50406 440 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ERFP50548 548 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 LY6DQ14210 128 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FAM174BQ3ZCQ3 159 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF691Q5VV52 312 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FRG2Q64ET8 278 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CAPN13Q6MZZ7 669 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 GALNT18Q6P9A2 607 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SHISA6Q6ZSJ9 500 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 UBE2R2Q712K3 238 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ADCK2Q7Z695 626 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SLC9B2Q86UD5 537 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 TMPRSS12Q86WS5 348 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SVOPQ8N4V2 548 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 SNX31Q8N9S9 440 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PIK3C3Q8NEB9 887 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 VPS37AQ8NEZ2 397 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FAM81AQ8TBF8 368 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 IPCEF1Q8WWN9 437 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 LCN9Q8WX39 176 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FCGR1BQ92637 280 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 TFGQ92734 400 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 TMEM159Q96B96 161 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FAM120BQ96EK7 910 aaKnown RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 VPS50Q96JG6 964 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF514Q96K75 400 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FRG2BQ96QU4 278 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 OR6C1Q96RD1 312 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 EPYCQ99645 322 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PITX2Q99697 317 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ZCCHC2Q9C0B9 1178 aaKnown RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ELOVL6Q9H5J4 265 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 EPS8L2Q9H6S3 715 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 GPR27Q9NS67 375 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 FAM118AQ9NWS6 357 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 VAPAQ9P0L0 249 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 WASF3Q9UPY6 502 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PDE10AQ9Y233 779 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF451Q9Y4E5 1061 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 PCDHGB2Q9Y5G2 931 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 MRPS18BQ9Y676 258 aaKnown RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 MED13Q9UHV7 2174 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 IGHV5-51A0A0C4DH38 117 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 CCDC160A6NGH7 325 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 NCF1BA6NI72 391 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 NCF1CA8MVU1 366 aaPredicted RBP4.52□□□□□ -1.69
EDEM3-203ENST00000439962 H3BSA7 217 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 MASP2O00187 686 aa4.52□□□□□ -1.69
EDEM3-203ENST00000439962 NUDT21O43809 227 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms