RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ELFN1P0C7U0 828 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 UQCRC2P22695 453 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 DEFA1P59665 94 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 DEFA3P59666 94 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 TAP2Q03519 686 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 PUM1Q14671 1186 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 CARTPTQ16568 116 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 DUSP7Q16829 419 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 REEP3Q6NUK4 255 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 NRSN1Q8IZ57 195 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 TAGAPQ8N103 731 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 LMNTD1Q8N9Z9 388 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 ST13P5Q8NFI4 369 aaPredicted RBP15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 OR9A1PQ8NGU1 263 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 CYB5D2Q8WUJ1 264 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 SORCS1Q8WY21 1168 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 FGF13Q92913 245 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 PDXPQ96GD0 296 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 CCDC32Q9BV29 185 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 SLC6A16Q9GZN6 736 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 HOXD1Q9GZZ0 328 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 CXorf36Q9H7Y0 433 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 DZANK1Q9NVP4 752 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 EHD3Q9NZN3 535 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 TAAR2Q9P1P5 351 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 NDOR1Q9UHB4 597 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 ICKQ9UPZ9 632 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 LSM2Q9Y333 95 aaKnown RBP15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 FAM227AF5H4B4 570 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 MAGP20916 626 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 LIM2P55344 173 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 SNRPGP62308 76 aaKnown RBP15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 MEF2AQ02078 507 aaPredicted RBP15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 RHAGQ02094 409 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 HYAL1Q12794 435 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 TCEAL5Q5H9L2 206 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 FAM78AQ5JUQ0 283 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 TMEM201Q5SNT2 666 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 ERAP2Q6P179 960 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 GET4Q7L5D6 327 aaPredicted RBP15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 MMP21Q8N119 569 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 NUAK2Q9H093 628 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 MTG2Q9H4K7 406 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 ITM2CQ9NQX7 267 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 FBXL12Q9NXK8 326 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 REV1Q9UBZ9 1251 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 KIAA1549LQ6ZVL6 1849 aa15.6■□□□□ 0.09
CLCNKA-203ENST00000439316 TRBV4-1A0A0J9YWV2 114 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 TLR4O00206 839 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 ENTPD6O75354 484 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 OXSR1O95747 527 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 SCG5P05408 212 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 ENDOUP21128 410 aaKnown RBP15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 FAM92BQ6ZTR7 304 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 VN1R5Q7Z5H4 357 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 HCAR2Q8TDS4 363 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 OTUB2Q96DC9 234 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 NLNQ9BYT8 704 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 C3orf14Q9HBI5 128 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 HHATLQ9HCP6 504 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 A4GALTQ9NPC4 353 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 C11orf16Q9NQ32 467 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 CRNNQ9UBG3 495 aaPredicted RBP15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 ITM2BQ9Y287 266 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 TRAPPC4Q9Y296 219 aa15.59■□□□□ 0.09
CLCNKA-203ENST00000439316 SLC9A3R1O14745 358 aaPredicted RBP15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 SOD1P00441 154 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 OSMP13725 252 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 POU1F1P28069 291 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 CSTF2P33240 577 aaKnown RBP eCLIP15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 PCYT1AP49585 367 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 TP53BP2Q13625 1128 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 GRIN2CQ14957 1233 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 POM121L1PQ3SYA9 428 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 CCDC92Q53HC0 331 aaPredicted RBP15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 RPS26P11Q5JNZ5 115 aaPredicted RBP15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 MEDAGQ5VYS4 303 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 SLX4IPQ5VYV7 408 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 SAXO2Q658L1 398 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 SYCE2Q6PIF2 218 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 CFAP206Q8IYR0 622 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 ZNF740Q8NDX6 193 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 UBE2E3Q969T4 207 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 NEURL3Q96EH8 262 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 LRIG1Q96JA1 1093 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 DHRS1Q96LJ7 313 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 ASB16Q96NS5 453 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 SLC30A2Q9BRI3 323 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 UCK2Q9BZX2 261 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 SMURF1Q9HCE7 757 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 MIEF1Q9NQG6 463 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 CCDC177Q9NQR7 707 aaPredicted RBP15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 SPATA7Q9P0W8 599 aa15.58■□□□□ 0.09
CLCNKA-203ENST00000439316 PSMD11O00231 422 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 CTDSP2O14595 271 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 APOA1P02647 267 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 CD72P21854 359 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 WEE1P30291 646 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 BMP8BP34820 402 aa15.58■□□□□ 0.08
CLCNKA-203ENST00000439316 ILKQ13418 452 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms