RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 PTBP2Q9UKA9 531 aaKnown RBP7.55□□□□□ -1.2
AC012494.1-201ENST00000439259 ZNF835Q9Y2P0 537 aa7.55□□□□□ -1.2
AC012494.1-201ENST00000439259 MMACHCQ9Y4U1 282 aa7.55□□□□□ -1.2
AC012494.1-201ENST00000439259 OTOGQ6ZRI0 2925 aa7.55□□□□□ -1.2
AC012494.1-201ENST00000439259 PDZD2O15018 2839 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 PCNX1Q96RV3 2341 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 PINLYPA6NC86 204 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 LRRC14BA6NHZ5 514 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 SUPT3HB4E1H0 165 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 C19orf84I3L1E1 186 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 UBXN8O00124 270 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 FCHO1O14526 889 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 EIF3HO15372 352 aaKnown RBP eCLIP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 HS6ST1O60243 411 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 LDB3O75112 727 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 SUPT3HO75486 399 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 OR2J2O76002 312 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 PDE9AO76083 593 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 TGFB1P01137 390 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 IFNA16P05015 189 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 SLC35E2BP0CK96 405 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 ESRRAP11474 423 aaPredicted RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 PCNAP12004 261 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 ABOP16442 354 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 ZNF24P17028 368 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 TFEBP19484 476 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 TRHRP34981 398 aaPredicted RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 SPRP35270 261 aaPredicted RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 MSH2P43246 934 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 MTTPP55157 894 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 CASP6P55212 293 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 HSD17B7P56937 341 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 ATP6V0D1P61421 351 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 IRF9Q00978 393 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 IRF8Q02556 426 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 ART3Q13508 389 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 BMPR2Q13873 1038 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 SLMAPQ14BN4 828 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 PDK4Q16654 411 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 KRTCAP3Q53RY4 240 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 GRTP1Q5TC63 336 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 TRIM40Q6P9F5 258 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 BNC2Q6ZN30 1099 aaPredicted RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 Q6ZPB1 254 aaPredicted RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 RAPH1Q70E73 1250 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 ISCA2Q86U28 154 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 SLC34A3Q8N130 599 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 CYP4Z2PQ8N1L4 340 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 ARMC10Q8N2F6 343 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 TCAIMQ8N3R3 496 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 ZNF808Q8N4W9 903 aaPredicted RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 TMEM156Q8N614 296 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 PDPRQ8NCN5 879 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 TTLQ8NG68 377 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 DOK4Q8TEW6 326 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 AGAP11Q8TF27 550 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 PTPMT1Q8WUK0 201 aaPredicted RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 TMEM125Q96AQ2 219 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 NXNL1Q96CM4 212 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 PTCD3Q96EY7 689 aaKnown RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 TSPAN17Q96FV3 270 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 SERINC2Q96SA4 455 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 NPLQ9BXD5 320 aaPredicted RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 CAPS2Q9BXY5 557 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 CD244Q9BZW8 370 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 MRPL18Q9H0U6 180 aaKnown RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 NT5DC2Q9H857 520 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 CNOT10Q9H9A5 744 aaKnown RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 COPS7BQ9H9Q2 264 aaPredicted RBP7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 IGSF5Q9NSI5 407 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 DEPPQ9NTK1 212 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 GPRC5BQ9NZH0 403 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 KCMF1Q9P0J7 381 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 DAPP1Q9UN19 280 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 MEMO1Q9Y316 297 aa7.54□□□□□ -1.2
AC012494.1-201ENST00000439259 A0A0G2JMM0 328 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 A0A1B0GTH9 108 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 A0A1W2PPB8 328 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 A0A1W2PRS3 328 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 WASHC1A8K0Z3 465 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 KIR3DP1A8MWS1 328 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 G3V3Y1 287 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 WWP2O00308 870 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 CLDN4O14493 209 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 ADAM10O14672 748 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 TFECO14948 347 aaPredicted RBP7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 PEX1O43933 1283 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 CDC40O60508 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 ZNF354AO60765 605 aaPredicted RBP7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 PRKRAO75569 313 aaKnown RBP7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 OR6B1O95007 311 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 S100BP04271 92 aaPredicted RBP7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 MTHFD2P13995 350 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 NOS3P29474 1203 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 MAGEA4P43358 317 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 ZNF630Q2M218 657 aaPredicted RBP7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 MROH9Q5TGP6 573 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 IL20RBQ6UXL0 311 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 RPTNQ6XPR3 784 aa7.53□□□□□ -1.2
AC012494.1-201ENST00000439259 DGAT2L6Q6ZPD8 337 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms