RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 LRRC1Q9BTT6 524 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 DEFB127Q9H1M4 99 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 VPS11Q9H270 941 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 DEPPQ9NTK1 212 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 IKBKGQ9Y6K9 419 aa17.11■□□□□ 0.33
AC004540.1-201ENST00000439120 FAM166BA8MTA8 275 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 G3V3Y1 287 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 URI1O94763 535 aaPredicted RBP17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 ETHE1O95571 254 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 P04436 131 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 RPS13P62277 151 aaKnown RBP17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 TNFRSF17Q02223 184 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 FOLH1Q04609 750 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 GTF2H2Q13888 395 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 CPSF6Q16630 551 aaKnown RBP eCLIP17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 ZNF750Q32MQ0 723 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 TMEM211Q6ICI0 200 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 GTF2H2CQ6P1K8 395 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 CYP20A1Q6UW02 462 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 FAM47EQ6ZV65 393 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 ZCCHC7Q8N3Z6 543 aaKnown RBP17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 GOLM1Q8NBJ4 401 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 OR52N2Q8NGI0 321 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 ATP6V1E2Q96A05 226 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 SGCZQ96LD1 299 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 DMRTA2Q96SC8 542 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 FAM173AQ9BQD7 235 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 TP63Q9H3D4 680 aaPredicted RBP17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 IPPKQ9H8X2 491 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 WDR41Q9HAD4 459 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 ZDHHC18Q9NUE0 388 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 LYARQ9NX58 379 aaKnown RBP17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 LRBAP50851 2863 aa17.1■□□□□ 0.33
AC004540.1-201ENST00000439120 H0YIV9 168 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 PLPP1O14494 284 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 OR10H2O60403 315 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 UGDHO60701 494 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 INHBAP08476 426 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 CNR1P21554 472 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 ARFIP1P53367 373 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 PCBP2Q15366 365 aaKnown RBP eCLIP17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 CDSNQ15517 529 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 NDUFAF5Q5TEU4 345 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 TAOK1Q7L7X3 1001 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 GOLGA7Q7Z5G4 137 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 SLC22A8Q8TCC7 542 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 ZNF721Q8TF20 911 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 PPWD1Q96BP3 646 aaKnown RBP17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 SENP5Q96HI0 755 aaPredicted RBP17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 SCYL1Q96KG9 808 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 PELOQ9BRX2 385 aaKnown RBP17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 TTTY12Q9BZ98 90 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 TSPYL1Q9H0U9 437 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 ACSS3Q9H6R3 686 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 SACM1LQ9NTJ5 587 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 NINJ2Q9NZG7 142 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 TSC22D4Q9Y3Q8 395 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 ATG4BQ9Y4P1 393 aa17.09■□□□□ 0.33
AC004540.1-201ENST00000439120 PCNX1Q96RV3 2341 aa17.08■□□□□ 0.33
AC004540.1-201ENST00000439120 HMX2A2RU54 273 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 LRRC14BA6NHZ5 514 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 ADAM10O14672 748 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 KLK8O60259 260 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 ALDOAP04075 364 aaKnown RBP17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 NR2F6P10588 404 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 ALOX15P16050 662 aaPredicted RBP17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 IGLV3-21P80748 117 aaPredicted RBP17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 ASPHQ12797 758 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 C18orf63Q68DL7 685 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 METTL2BQ6P1Q9 378 aaKnown RBP17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 SLC29A4Q7RTT9 530 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 NUBPLQ8TB37 319 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 FBXL20Q96IG2 436 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 C16orf45Q96MC5 204 aaPredicted RBP17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 CNPPD1Q9BV87 410 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 PLSCR2Q9NRY7 297 aa17.08■□□□□ 0.32
AC004540.1-201ENST00000439120 A0A0G2JMM0 328 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 IQANK1A0A1B0GTG1 560 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 A0A1W2PPB8 328 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 A0A1W2PRS3 328 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 PINLYPA6NC86 204 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 KIR3DP1A8MWS1 328 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 C19orf84I3L1E1 186 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 PRKRAO75569 313 aaKnown RBP17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 SIX3O95343 332 aaPredicted RBP17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 CLDN9O95484 217 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 ACSL3O95573 720 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 CCNG1P51959 295 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 HNRNPH2P55795 449 aaKnown RBP17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 CUL3Q13618 768 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 WHAMMP3Q1A5X7 153 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 MPEG1Q2M385 716 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 TECRLQ5HYJ1 363 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 NUDT13Q86X67 352 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 ST13P4Q8IZP2 240 aaPredicted RBP17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 PTGR2Q8N8N7 351 aaPredicted RBP17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 ASB5Q8WWX0 329 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 GAL3ST4Q96RP7 486 aa17.07■□□□□ 0.32
AC004540.1-201ENST00000439120 IL1RL2Q9HB29 575 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms