RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 F8P00451 2351 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 GABRR3A8MPY1 467 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 NPIPA5E9PKD4 350 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 UBFD1O14562 309 aaKnown RBP8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 OR7A17O14581 309 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 NDUFS4O43181 175 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 CHST10O43529 356 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 MAN1A2O60476 641 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 EDF1O60869 148 aaKnown RBP8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 B4GALT2O60909 372 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 WISP2O76076 250 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 MLYCDO95822 493 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 KITP10721 976 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 NPPBP16860 134 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 IL10P22301 178 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 HTR1EP28566 365 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 ARL1P40616 181 aaPredicted RBP8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 HNF4AP41235 474 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 CA7P43166 264 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 PIK3CGP48736 1102 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 CCNG1P51959 295 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 OLR1P78380 273 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 ALDH6A1Q02252 535 aaKnown RBP8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 SF3A3Q12874 501 aaKnown RBP eCLIP8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 HERC3Q15034 1050 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 C3AR1Q16581 482 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 DEFB134Q4QY38 66 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 SPINK14Q6IE38 97 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 H3F3CQ6NXT2 135 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 RPTNQ6XPR3 784 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 VASH1Q7L8A9 365 aaPredicted RBP8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 LRRC70Q7Z2Q7 622 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 CPLX4Q7Z7G2 160 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 KLHDC8AQ8IYD2 350 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 ZNF808Q8N4W9 903 aaPredicted RBP8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 SLC5A8Q8N695 610 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 PLPP5Q8NEB5 264 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 AGR3Q8TD06 166 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 TBC1D20Q96BZ9 403 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 THOC1Q96FV9 657 aaKnown RBP8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 C7orf26Q96N11 449 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 SIGLEC12Q96PQ1 595 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 SGPP1Q9BX95 441 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 HES7Q9BYE0 225 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 RHBGQ9H310 441 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 CDCP1Q9H5V8 836 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 MMP25Q9NPA2 562 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 MID1IP1Q9NPA3 183 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 PNPOQ9NVS9 261 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 NPIPA1Q9UND3 350 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 KLF2Q9Y5W3 355 aaPredicted RBP8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 SLC22A7Q9Y694 548 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 SPG11Q96JI7 2443 aa8.62□□□□□ -1.03
AC011228.1-201ENST00000439027 CSMD1Q96PZ7 3565 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 A0A1B0GTL3 188 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 MAGEB17A8MXT2 336 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 CLGNO14967 610 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 SLC19A2O60779 497 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 DNAJB6O75190 326 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 SNUPNO95149 360 aaKnown RBP8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 B3GALT4O96024 378 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 OTCP00480 354 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 FHP07954 510 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 ZNF888P0CJ79 500 aaPredicted RBP8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 COX6B1P14854 86 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 ALOX12P18054 663 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 EPORP19235 508 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 DRD4P21917 467 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 SMSP52788 366 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 PKNOX1P55347 436 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 SKP1P63208 163 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 RHAGQ02094 409 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 RGS1Q08116 209 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 GALNT1Q10472 559 aaPredicted RBP8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 TRAF3Q13114 568 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 MAPKAPK3Q16644 382 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 KRTCAP3Q53RY4 240 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 SH2D4BQ5SQS7 431 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 CATSPEREQ5SY80 951 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 GPRIN3Q6ZVF9 776 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 MILR1Q7Z6M3 343 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 RPS19BP1Q86WX3 136 aaKnown RBP8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 MYLK4Q86YV6 388 aaPredicted RBP8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 HORMAD2Q8N7B1 307 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 ZNF781Q8N8C0 355 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 TMEM178AQ8NBL3 297 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 ZNF740Q8NDX6 193 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 MDS2Q8NDY4 140 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 ABHD11Q8NFV4 315 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 OR52B6Q8NGF0 335 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 AGAP11Q8TF27 550 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 ITPKCQ96DU7 683 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 PTCHD1Q96NR3 888 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 OR4K3Q96R72 315 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 OR1F2PQ96R84 312 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 ZNF382Q96SR6 550 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 NPAS2Q99743 824 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 TNFRSF12AQ9NP84 129 aa8.61□□□□□ -1.03
AC011228.1-201ENST00000439027 CHST11Q9NPF2 352 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms