RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 PSMD12O00232 456 aaPredicted RBP9.9□□□□□ -0.82
RTN4-211ENST00000438462 BIN1O00499 593 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 FRS3O43559 492 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 OR56A5P0C7T3 313 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 GRK3P35626 688 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 PPP1R2P41236 205 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 ARHGAP25P42331 645 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 STARP49675 285 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 RPS15AP62244 130 aaKnown RBP9.9□□□□□ -0.82
RTN4-211ENST00000438462 FUT7Q11130 342 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 FGFBP1Q14512 234 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 HERC3Q15034 1050 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 PHKG1Q16816 387 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 KBTBD12Q3ZCT8 623 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 BICRALQ6AI39 1079 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 ASPHD2Q6ICH7 369 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 ASPGQ86U10 573 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 LKAAEAR1Q8TD35 194 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 SMPDL3AQ92484 453 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 NXNL1Q96CM4 212 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 OR10A4Q9H209 315 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 RHBGQ9H310 441 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 AURKAIP1Q9NWT8 199 aaPredicted RBP9.9□□□□□ -0.82
RTN4-211ENST00000438462 RCOR1Q9UKL0 485 aa9.9□□□□□ -0.82
RTN4-211ENST00000438462 UQCRHLA0A096LP55 91 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 DNAJC9-AS1A6NH13 148 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 H7BY64 318 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 KNG1P01042 644 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 ERGP11308 486 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 PRTN3P24158 256 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 SLC25A11Q02978 314 aaKnown RBP9.89□□□□□ -0.83
RTN4-211ENST00000438462 CCNIQ14094 377 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 MPEG1Q2M385 716 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 CTU2Q2VPK5 515 aaKnown RBP9.89□□□□□ -0.83
RTN4-211ENST00000438462 PIGGQ5H8A4 983 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 TBCELQ5QJ74 424 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 PACS1Q6VY07 963 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 CDKL3Q8IVW4 592 aaPredicted RBP9.89□□□□□ -0.83
RTN4-211ENST00000438462 FBXL14Q8N1E6 418 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 AFAP1L2Q8N4X5 818 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 TC2NQ8N9U0 490 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 ZNF740Q8NDX6 193 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 OR5L2Q8NGL0 311 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 FIG4Q92562 907 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 DIO2Q92813 273 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 SMARCE1Q969G3 411 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 TM4SF19Q96DZ7 209 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 CCDC34Q96HJ3 373 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 OXNAD1Q96HP4 312 aaPredicted RBP9.89□□□□□ -0.83
RTN4-211ENST00000438462 RILPQ96NA2 401 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 PRAP1Q96NZ9 151 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 SYT3Q9BQG1 590 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 FSD1LQ9BXM9 530 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 OR8D2Q9GZM6 311 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 HIF1ANQ9NWT6 349 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 WHRNQ9P202 907 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 SAE1Q9UBE0 346 aaPredicted RBP9.89□□□□□ -0.83
RTN4-211ENST00000438462 FETUBQ9UGM5 382 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 MOKQ9UQ07 419 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 GRIP1Q9Y3R0 1128 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 MMACHCQ9Y4U1 282 aa9.89□□□□□ -0.83
RTN4-211ENST00000438462 C5orf60A6NFR6 353 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 C3orf84H3BNL1 204 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 LILRA1O75019 489 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 SMC2O95347 1197 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 PPP1R3DO95685 299 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 TACSTD2P09758 323 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 SLC35G6P0C7Q6 338 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 SNRPBP14678 240 aaKnown RBP9.88□□□□□ -0.83
RTN4-211ENST00000438462 MGAT1P26572 445 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 CD68P34810 354 aaPredicted RBP9.88□□□□□ -0.83
RTN4-211ENST00000438462 COILP38432 576 aaPredicted RBP9.88□□□□□ -0.83
RTN4-211ENST00000438462 LHX2P50458 406 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 CLDN18P56856 261 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 PHC1P78364 1004 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 ITIH4Q14624 930 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 TAB1Q15750 504 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 C1orf229Q6ZS94 237 aaPredicted RBP9.88□□□□□ -0.83
RTN4-211ENST00000438462 TRIM42Q8IWZ5 723 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 PQLC3Q8N755 202 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 PPFIBP2Q8ND30 876 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 ZNF540Q8NDQ6 660 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 OR8K3Q8NH51 312 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 SKA2Q8WVK7 121 aaPredicted RBP9.88□□□□□ -0.83
RTN4-211ENST00000438462 TMEM186Q96B77 213 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 RHBDF1Q96CC6 855 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 DNAJC1Q96KC8 554 aaKnown RBP9.88□□□□□ -0.83
RTN4-211ENST00000438462 EBNA1BP2Q99848 306 aaKnown RBP9.88□□□□□ -0.83
RTN4-211ENST00000438462 NTN4Q9HB63 628 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 GPR52Q9Y2T5 361 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 CLDN16Q9Y5I7 305 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 SNX8Q9Y5X2 465 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 CSMD3Q7Z407 3707 aa9.88□□□□□ -0.83
RTN4-211ENST00000438462 KCNE1BA0A087WTH5 132 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 B4DSR2 109 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 E7EQL1 145 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 ABCD4O14678 606 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 GNB5O14775 395 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 NRDCO43847 1150 aa9.87□□□□□ -0.83
RTN4-211ENST00000438462 FGFR1OPO95684 399 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms