RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 AP3S2P59780 193 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 SLC35A2P78381 396 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 RAB33AQ14088 237 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 FAM219BQ5XKK7 198 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 GTF2IRD2BQ6EKJ0 949 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TAS1R1Q7RTX1 841 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 ADGRD2Q7Z7M1 963 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 RBM23Q86U06 439 aaKnown RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 OAFQ86UD1 273 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 GTF2IRD2Q86UP8 949 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 LHFPL3Q86UP9 236 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 FAM129CQ86XR2 697 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 Q8N402 240 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PARP16Q8N5Y8 322 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 COX18Q8N8Q8 333 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 L3MBTL4Q8NA19 623 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 OR4K5Q8NGD3 323 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 OR8J2Q8NGG1 315 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 BBS10Q8TAM1 723 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 GNPDA2Q8TDQ7 276 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 HRASLS5Q96KN8 279 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 MBOAT4Q96T53 435 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NELL2Q99435 816 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 C17orf62Q9BQA9 187 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CWH43Q9H720 699 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PDFQ9HBH1 243 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 LTB4R2Q9NPC1 389 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TRIM36Q9NQ86 728 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 THSD7AQ9UPZ6 1657 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM88BA6NKF7 163 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NDUFS4O43181 175 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 AGR2O95994 175 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PEPDP12955 493 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CR2P20023 1033 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 FAUP35544 74 aaKnown RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CSNK1DP48730 415 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 SGSHP51688 502 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 GP2P55259 537 aaKnown RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PITPNAQ00169 270 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 MLLT1Q03111 559 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 OXA1LQ15070 435 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 TEAD2Q15562 447 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 GPR68Q15743 365 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 UGT8Q16880 541 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CATSPEREQ5SY80 951 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 AGAP6Q5VW22 663 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 KDM4DQ6B0I6 523 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CNKSR3Q6P9H4 555 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 HSDL2Q6YN16 418 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 FAM217AQ8IXS0 508 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CADM2Q8N3J6 435 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 SGCDQ92629 289 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 NEIL2Q969S2 332 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 AGAP4Q96P64 663 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 DOCK5Q9H7D0 1870 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 WDR26Q9H7D7 661 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 GPN1Q9HCN4 374 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-205ENST00000438362 SPHK2Q9NRA0 654 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 SLC25A37Q9NYZ2 338 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 IL37Q9NZH6 218 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PSORS1C1Q9UIG5 152 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 PCDHGB1Q9Y5G3 927 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 CORINQ9Y5Q5 1042 aa6.39□□□□□ -1.39
CSDE1-205ENST00000438362 A0A1W2PQL4 384 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CTDSP2O14595 271 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 HCN1O60741 890 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 REM1O75628 298 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 PRR35P0CG20 571 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 C8orf89P0DMQ9 161 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ALPPL2P10696 532 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ADH5P11766 374 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 IL7P13232 177 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 IFI30P13284 250 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 F8A1P23610 371 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 OMPP47874 163 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 GNG2P59768 71 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 GMFBP60983 142 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 RAB8AP61006 207 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ABATP80404 500 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 MC1RQ01726 317 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 PRKCDQ05655 676 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 AAK1Q2M2I8 961 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 UAP1L1Q3KQV9 507 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 MPP7Q5T2T1 576 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 LRIF1Q5T3J3 769 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 PRPF38BQ5VTL8 546 aaKnown RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 HLA-DQA1Q5Y7H0 255 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ANKRD34AQ69YU3 496 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 USP51Q70EK9 711 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CHMP1BQ7LBR1 199 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 SLC7A5P1Q8MH63 180 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 TMEM145Q8NBT3 493 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 OR14C36Q8NHC7 312 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 SETD6Q8TBK2 473 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 SORCS1Q8WY21 1168 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 CIDECQ96AQ7 238 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-205ENST00000438362 ECHDC3Q96DC8 303 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 MCHR1Q99705 422 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 NDC1Q9BTX1 674 aa6.38□□□□□ -1.39
CSDE1-205ENST00000438362 DUSP21Q9H596 190 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms