RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CLDN10P78369 228 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 C6orf136Q5SQH8 315 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 SLC27A4Q6P1M0 643 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 TMPPEQ6ZT21 453 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 SPERTQ8NA61 448 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 NKX2-4Q9H2Z4 354 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 NHSL1Q5SYE7 1610 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 VSTM2BA6NLU5 285 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 IL3P08700 152 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 C7P10643 843 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 GALNT15Q8N3T1 639 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 FCRL3Q96P31 734 aaPredicted RBP15.21■□□□□ 0.03
PTPN13-204ENST00000436978 IGKV6D-21A0A0A0MT36 114 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 PORP16435 677 aaPredicted RBP15.21■□□□□ 0.03
PTPN13-204ENST00000436978 RIPPLY1Q0D2K3 151 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 NSMAFQ92636 917 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 TUBA1CQ9BQE3 449 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 SLC17A9Q9BYT1 436 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 CHIAQ9BZP6 476 aa15.21■□□□□ 0.03
PTPN13-204ENST00000436978 A6NCN8 305 aa15.21■□□□□ 0.02
PTPN13-204ENST00000436978 CDC123O75794 336 aaPredicted RBP15.21■□□□□ 0.02
PTPN13-204ENST00000436978 F7P08709 466 aaPredicted RBP15.21■□□□□ 0.02
PTPN13-204ENST00000436978 PMM1Q92871 262 aa15.21■□□□□ 0.02
PTPN13-204ENST00000436978 FAM129BQ96TA1 746 aa15.21■□□□□ 0.02
PTPN13-204ENST00000436978 ID2Q02363 134 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 TMEM107Q6UX40 140 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 LRRC69Q6ZNQ3 347 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 LMO3Q8TAP4 145 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 TOR3AQ9H497 397 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 HSPA12AO43301 675 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 OR7A10O76100 309 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 STEAP4Q687X5 459 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 CARM1Q86X55 608 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 OR8H3Q8N146 312 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 THAP4Q8WY91 577 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 TMEM74Q96NL1 305 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 MROQ9BYG7 248 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 SLC6A15Q9H2J7 730 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 ABCB7O75027 752 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 LBX1P52954 281 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 ARSFP54793 590 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 NANOGP8Q6NSW7 305 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 ARHGAP11AQ6P4F7 1023 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 KLHDC10Q6PID8 442 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF773Q6PK81 442 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 OR4K1Q8NGD4 311 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 NANOGQ9H9S0 305 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 PELI2Q9HAT8 420 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 GMEB1Q9Y692 573 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 PIAS3Q9Y6X2 628 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 CROCCQ5TZA2 2017 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 GPR89AB7ZAQ6 455 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 GPR89BP0CG08 455 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 CTBP2P56545 445 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 MEF2AQ02078 507 aaPredicted RBP15.2■□□□□ 0.02
PTPN13-204ENST00000436978 ABRAXAS2Q15018 415 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 GLT8D1Q68CQ7 371 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 GPRIN1Q7Z2K8 1008 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 RELTQ969Z4 430 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 PKP2Q99959 881 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 FAM72CH0Y354 149 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 IFNA7P01567 189 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 FDXRP22570 491 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 PTPRCAPQ14761 206 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 FAM72AQ5TYM5 149 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 FAM72DQ6L9T8 149 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 FAM72BQ86X60 149 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 FCAMRQ8WWV6 532 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 SLC7A6OSQ96CW6 309 aaPredicted RBP15.2■□□□□ 0.02
PTPN13-204ENST00000436978 SLC30A2Q9BRI3 323 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 RABL2AQ9UBK7 228 aaPredicted RBP15.2■□□□□ 0.02
PTPN13-204ENST00000436978 RABL2BQ9UNT1 228 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 VILLO15195 856 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 SOX14O95416 240 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 FGF3P11487 239 aaPredicted RBP15.2■□□□□ 0.02
PTPN13-204ENST00000436978 RIN1Q13671 783 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 AKAP1Q92667 903 aaKnown RBP eCLIP15.2■□□□□ 0.02
PTPN13-204ENST00000436978 TTYH2Q9BSA4 534 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 GLDCP23378 1020 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 MAZP56270 477 aaKnown RBP15.2■□□□□ 0.02
PTPN13-204ENST00000436978 GRM7Q14831 915 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 LRIT3Q3SXY7 679 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 KIAA0895LQ68EN5 471 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 C3P1Q6ZMU1 363 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 ZNF317Q96PQ6 595 aaPredicted RBP15.2■□□□□ 0.02
PTPN13-204ENST00000436978 CD207Q9UJ71 328 aa15.2■□□□□ 0.02
PTPN13-204ENST00000436978 S1PR4O95977 384 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 SLC14A2Q15849 920 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 PLEKHN1Q494U1 663 aaPredicted RBP15.19■□□□□ 0.02
PTPN13-204ENST00000436978 RUNDC3AQ59EK9 446 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 ALDH16A1Q8IZ83 802 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 PHTF2Q8N3S3 785 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 SCGB2A1O75556 95 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 SCGB1D2O95969 90 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 H2BFMP0C1H6 154 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 HHEXQ03014 270 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 LDLRAD1Q5T700 205 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 PHOSPHO2Q8TCD6 241 aa15.19■□□□□ 0.02
PTPN13-204ENST00000436978 GAL3ST3Q96A11 431 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms