RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ACSS1Q9NUB1 689 aaPredicted RBP21.67■■□□□ 1.06
CPSF4-204ENST00000436336 PCDHGB4Q9UN71 923 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 ZNF780BQ9Y6R6 833 aa21.67■■□□□ 1.06
CPSF4-204ENST00000436336 CPNE3O75131 537 aaKnown RBP21.66■■□□□ 1.06
CPSF4-204ENST00000436336 CPSF4O95639 269 aaKnown RBP21.66■■□□□ 1.06
CPSF4-204ENST00000436336 NTRK1P04629 796 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 ITIH1P19827 911 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 EFNA1P20827 205 aaPredicted RBP21.66■■□□□ 1.06
CPSF4-204ENST00000436336 IL10P22301 178 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 NTSP30990 170 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 PSME3P61289 254 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 MLC1Q15049 377 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 ARHGAP40Q5TG30 622 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 MED25Q71SY5 747 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 ZNF595Q8IYB9 648 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 OR4K14Q8NGD5 310 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 GOT1L1Q8NHS2 421 aaPredicted RBP21.66■■□□□ 1.06
CPSF4-204ENST00000436336 OR5P2Q8WZ92 322 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 TBC1D20Q96BZ9 403 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 CNRIP1Q96F85 164 aaPredicted RBP21.66■■□□□ 1.06
CPSF4-204ENST00000436336 OR1F2PQ96R84 312 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 BBS4Q96RK4 519 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 GPATCH1Q9BRR8 931 aaKnown RBP21.66■■□□□ 1.06
CPSF4-204ENST00000436336 SLAMF7Q9NQ25 335 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 PCDHGA7Q9Y5G6 932 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 MYO1GB0I1T2 1018 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 GSC2O15499 205 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 DNAJC8O75937 253 aaPredicted RBP21.66■■□□□ 1.06
CPSF4-204ENST00000436336 ANP32DO95626 131 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 C6orf47O95873 294 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 PPP2R1BP30154 601 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 CDKN2CP42773 168 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 XCR1P46094 333 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 MANFP55145 182 aaKnown RBP21.66■■□□□ 1.06
CPSF4-204ENST00000436336 ABHD18Q0P651 414 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 DCAF12Q5T6F0 453 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 KIF2BQ8N4N8 673 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 OR4A15Q8NGL6 344 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 CADM1Q9BY67 442 aaKnown RBP21.66■■□□□ 1.06
CPSF4-204ENST00000436336 RAPGEFL1Q9UHV5 662 aa21.66■■□□□ 1.06
CPSF4-204ENST00000436336 FHP07954 510 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 JMJD7P0C870 316 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 CSNK2A2P19784 350 aaPredicted RBP21.65■■□□□ 1.06
CPSF4-204ENST00000436336 PTPN6P29350 595 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 HBA1P69905 142 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 CAPRIN1Q14444 709 aaKnown RBP21.65■■□□□ 1.06
CPSF4-204ENST00000436336 ZNF385CQ66K41 422 aaPredicted RBP21.65■■□□□ 1.06
CPSF4-204ENST00000436336 DNAJC14Q6Y2X3 702 aaPredicted RBP21.65■■□□□ 1.06
CPSF4-204ENST00000436336 ZFP28Q8NHY6 868 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 ZNF681Q96N22 645 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 CGREF1Q99674 301 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 SLC39A3Q9BRY0 314 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 ZPBPQ9BS86 351 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 YIPF2Q9BWQ6 316 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 RBCK1Q9BYM8 510 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 TAS2R9Q9NYW1 312 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 VAPAQ9P0L0 249 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 TRPC4Q9UBN4 977 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 PCDHB14Q9Y5E9 798 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 PTPRBP23467 1997 aa21.65■■□□□ 1.06
CPSF4-204ENST00000436336 TRBV5-3A0A0A0MS03 114 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 CLDN4O14493 209 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 ONECUT2O95948 504 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 ZCCHC18P0CG32 403 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 HOXB9P17482 250 aaPredicted RBP21.64■■□□□ 1.06
CPSF4-204ENST00000436336 RORAP35398 523 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 ETV5P41161 510 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 NOVA1P51513 510 aaKnown RBP21.64■■□□□ 1.06
CPSF4-204ENST00000436336 MAPK10P53779 464 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 FOLH1Q04609 750 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 WDR36Q8NI36 951 aaKnown RBP21.64■■□□□ 1.06
CPSF4-204ENST00000436336 LRFN5Q96NI6 719 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 PHF12Q96QT6 1004 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 TAAR9Q96RI9 348 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 GLIPR2Q9H4G4 154 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 NEUROD4Q9HD90 331 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 MKKSQ9NPJ1 570 aaPredicted RBP21.64■■□□□ 1.06
CPSF4-204ENST00000436336 ZNF282Q9UDV7 671 aaPredicted RBP21.64■■□□□ 1.06
CPSF4-204ENST00000436336 PRPF19Q9UMS4 504 aaKnown RBP21.64■■□□□ 1.06
CPSF4-204ENST00000436336 ERVK-11Q9UQG0 969 aa21.64■■□□□ 1.06
CPSF4-204ENST00000436336 GVINP1Q7Z2Y8 2422 aa21.64■■□□□ 1.05
CPSF4-204ENST00000436336 C15orf38-AP3S2A0A0A6YYH1 394 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 PLD2O14939 933 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 FGF17O60258 216 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 LDB3O75112 727 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 GPR75O95800 540 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 GSNP06396 782 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 C8orf89P0DMQ9 161 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 MPIP34949 423 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 FEN1P39748 380 aaKnown RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 XKP51811 444 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 DCDP81605 110 aaKnown RBP21.63■■□□□ 1.05
CPSF4-204ENST00000436336 ARPINQ7Z6K5 226 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 TMPRSS12Q86WS5 348 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 PMEPA1Q969W9 287 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 MCUR1Q96AQ8 359 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 AMDHD1Q96NU7 426 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 ANKRD27Q96NW4 1050 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 DDA1Q9BW61 102 aa21.63■■□□□ 1.05
CPSF4-204ENST00000436336 ASPSCR1Q9BZE9 553 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms