RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 C9orf84Q5VXU9 1444 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 TRAPPC8Q9Y2L5 1435 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 A0A1W2PNU3 283 aaPredicted RBP3.21□□□□□ -1.9
LINC00353-201ENST00000435401 RNF103O00237 685 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 CXCL14O95715 111 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 LYNP07948 512 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 ATP6V1E1P36543 226 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 MSLNQ13421 630 aaPredicted RBP3.21□□□□□ -1.9
LINC00353-201ENST00000435401 MTHFSDQ2M296 383 aaKnown RBP3.21□□□□□ -1.9
LINC00353-201ENST00000435401 WSCD2Q2TBF2 565 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 MOGAT2Q3SYC2 334 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 SNRNP48Q6IEG0 339 aaKnown RBP3.21□□□□□ -1.9
LINC00353-201ENST00000435401 CAPN13Q6MZZ7 669 aaPredicted RBP3.21□□□□□ -1.9
LINC00353-201ENST00000435401 NEPROQ6NW34 567 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 TRIM65Q6PJ69 517 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 GDPGP1Q6ZNW5 385 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 TOM1L2Q6ZVM7 507 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 NLRP14Q86W24 1093 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 ARL10Q8N8L6 244 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 Q8NBF4 154 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 CCDC197Q8NCU1 140 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 OR52B6Q8NGF0 335 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 CHURC1Q8WUH1 139 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 LIPHQ8WWY8 451 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 ATP6V0A1Q93050 837 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 PCED1BQ96HM7 432 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 GUCD1Q96NT3 240 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 AGAP4Q96P64 663 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 GAL3ST4Q96RP7 486 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 IWS1Q96ST2 819 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 SSX3Q99909 188 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 AGPAT1Q99943 283 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 FGFBP2Q9BYJ0 223 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 PLEKHA3Q9HB20 300 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 GPN1Q9HCN4 374 aaPredicted RBP3.21□□□□□ -1.9
LINC00353-201ENST00000435401 KCNMB3Q9NPA1 279 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 TEX10Q9NXF1 929 aaPredicted RBP3.21□□□□□ -1.9
LINC00353-201ENST00000435401 MIS18AQ9NYP9 233 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 PLEK2Q9NYT0 353 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 NUDT4Q9NZJ9 180 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 NDUFA13Q9P0J0 144 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 APPL1Q9UKG1 709 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 FOXA2Q9Y261 457 aaPredicted RBP3.21□□□□□ -1.9
LINC00353-201ENST00000435401 KNSTRNQ9Y448 316 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 CCDC18Q5T9S5 1454 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 FYCO1Q9BQS8 1478 aa3.21□□□□□ -1.9
LINC00353-201ENST00000435401 STRCQ7RTU9 1775 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 PLCH2O75038 1416 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 CEP162Q5TB80 1403 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 CASKIN1Q8WXD9 1431 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 MYO3AQ8NEV4 1616 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 CEP152O94986 1710 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 IGHV3-38A0A0C4DH36 116 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 CCDC69A6NI79 296 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 TCP10L2B9ZVM9 353 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 ZNF749O43361 778 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 IDH3BO43837 385 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 CSO75390 466 aaKnown RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 BCAS2O75934 225 aaPredicted RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 GATA1P15976 413 aaPredicted RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 GPX3P22352 226 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 ID1P41134 155 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 GSCP56915 257 aaPredicted RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 HUNKP57058 714 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 ZNF177Q13360 481 aaPredicted RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 NFATC2Q13469 925 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 STX1AQ16623 288 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 LCLAT1Q6UWP7 414 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 RABEPKQ7Z6M1 372 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 LRRTM1Q86UE6 522 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 KCNMB4Q86W47 210 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 ELMOD1Q8N336 334 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 SIDT2Q8NBJ9 832 aaKnown RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 RELL2Q8NC24 303 aaPredicted RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 OR10G7Q8NGN6 311 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 OR4L1Q8NH43 312 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 SSC4DQ8WTU2 575 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 PRICKLE1Q96MT3 831 aaPredicted RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 NUSAP1Q9BXS6 441 aaKnown RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 VIPAS39Q9H9C1 493 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 S100A14Q9HCY8 104 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 DDX28Q9NUL7 540 aaKnown RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 MED17Q9NVC6 651 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 TDRKHQ9Y2W6 561 aaKnown RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 CFAP65Q6ZU64 1925 aaKnown RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 ZNF518AQ6AHZ1 1483 aa3.2□□□□□ -1.9
LINC00353-201ENST00000435401 INO80Q9ULG1 1556 aaPredicted RBP3.2□□□□□ -1.9
LINC00353-201ENST00000435401 ATP7AQ04656 1500 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 EHBP1L1Q8N3D4 1523 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 LOC105371242A0A075B767 164 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 SYCE3A1L190 88 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 SLC28A1O00337 649 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 SOCS3O14543 225 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 TNFSF12O43508 249 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 SNAP91O60641 907 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 FGF19O95750 216 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 BAG2O95816 211 aa3.19□□□□□ -1.9
LINC00353-201ENST00000435401 ABHD2P08910 425 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms