RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 KLHL17Q6TDP4 642 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 NUDT18Q6ZVK8 323 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 LACC1Q8IV20 430 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 TBC1D19Q8N5T2 526 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 B3GNT7Q8NFL0 401 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 APOBEC4Q8WW27 367 aaKnown RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 RPL3LQ92901 407 aaKnown RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 BADQ92934 168 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 SLC35G5Q96KT7 338 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 FERD3LQ96RJ6 166 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 TIMM29Q9BSF4 260 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 BTBD2Q9BX70 525 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 TMEM121BQ9BXQ6 578 aaPredicted RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 TEX101Q9BY14 249 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 MTIF3Q9H2K0 278 aaKnown RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 RMI1Q9H9A7 625 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 TRPV4Q9HBA0 871 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 PHPT1Q9NRX4 125 aaPredicted RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 CUEDC1Q9NWM3 386 aaPredicted RBP9.9□□□□□ -0.82
CD44-210ENST00000434472 MS4A12Q9NXJ0 267 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 GPR83Q9NYM4 423 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 LMCD1Q9NZU5 365 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.9□□□□□ -0.82
CD44-210ENST00000434472 PCDHGA3Q9Y5H0 932 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 LRRK1Q38SD2 2015 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 CENPFP49454 3210 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 CEP350Q5VT06 3117 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 DSPPQ9NZW4 1301 aa9.9□□□□□ -0.82
CD44-210ENST00000434472 A0A1W2PPV9 198 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 IGLON5A6NGN9 336 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 H7BY64 318 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 TLR4O00206 839 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 RTCAO00442 366 aaKnown RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 OR1F1O43749 312 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SLC28A2O43868 658 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 KDM1AO60341 852 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SLITRK5O94991 958 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 PCDH8O95206 1070 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 TBX6O95947 436 aaPredicted RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 ADH1BP00325 375 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 H1F0P07305 194 aaKnown RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 CHMP24386 653 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 C21orf33P30042 268 aaPredicted RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 NTSP30990 170 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 EIF2DP41214 584 aaKnown RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 KHKP50053 298 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 CLCNKAP51800 687 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 NUDT6P53370 316 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 CSNK1G2P78368 415 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 ABATP80404 500 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 HSPB3Q12988 150 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 PUM1Q14671 1186 aaKnown RBP eCLIP9.89□□□□□ -0.83
CD44-210ENST00000434472 NDUFA9Q16795 377 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 DUSP7Q16829 419 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 CYP27C1Q4G0S4 372 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 TMEM201Q5SNT2 666 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SLX4IPQ5VYV7 408 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 BHLHB9Q6PI77 547 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 TRIM69Q86WT6 500 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 RBM12BQ8IXT5 1001 aaKnown RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 MMP21Q8N119 569 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 BBS10Q8TAM1 723 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SFXN5Q8TD22 340 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 NR4A3Q92570 626 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 EXOSC8Q96B26 276 aaKnown RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 MOAP1Q96BY2 351 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 ZFYVE19Q96K21 471 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 FAM210AQ96ND0 272 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 CAMK1GQ96NX5 476 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 PRAP1Q96NZ9 151 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 MENTQ9BUN1 341 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 NXF2Q9GZY0 626 aaKnown RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 WDR26Q9H7D7 661 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SLAMF7Q9NQ25 335 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SEMA3GQ9NS98 782 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SIRT3Q9NTG7 399 aaPredicted RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 GDE1Q9NZC3 331 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SELENONQ9NZV5 590 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 NDOR1Q9UHB4 597 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 NUP214P35658 2090 aaPredicted RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 A0A0A6YYD5 115 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 HMGN4O00479 90 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 RECKO95980 971 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 POU2F1P14859 743 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 S100A5P33763 92 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 CNR2P34972 360 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 GPC1P35052 558 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SOX6P35712 828 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 OPRD1P41143 372 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 SSR2P43308 183 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 RGS6P49758 472 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 LIM2P55344 173 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 ALDH6A1Q02252 535 aaKnown RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 ZNF45Q02386 682 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 PRDX1Q06830 199 aaKnown RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 COX10Q12887 443 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 ZNF181Q2M3W8 571 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 RPS26P11Q5JNZ5 115 aaPredicted RBP9.89□□□□□ -0.83
CD44-210ENST00000434472 PLAG1Q6DJT9 500 aa9.89□□□□□ -0.83
CD44-210ENST00000434472 TMEM64Q6YI46 380 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms