RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 IDSP22304 550 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 APEX1P27695 318 aaKnown RBP13.12□□□□□ -0.31
SGMS1-203ENST00000429490 MAN2A2P49641 1150 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 BAK1Q16611 211 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 CLEC4MQ9H2X3 399 aaPredicted RBP13.12□□□□□ -0.31
SGMS1-203ENST00000429490 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
SGMS1-203ENST00000429490 A0A1W2PPK0 400 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 ORC5O43913 435 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 NCR1O76036 304 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 RHCEP18577 417 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 MAP2K3P46734 347 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 ZNF91Q05481 1191 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 ZNF791Q3KP31 576 aaPredicted RBP13.12□□□□□ -0.31
SGMS1-203ENST00000429490 MZT2AQ6P582 158 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 VN1R5Q7Z5H4 357 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 HSD11B1LQ7Z5J1 315 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 NOXA1Q86UR1 476 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 OR5D16Q8NGK9 328 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 SNAPC3Q92966 411 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 ZNF226Q9NYT6 803 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 STUB1Q9UNE7 303 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 PCDHGB1Q9Y5G3 927 aa13.12□□□□□ -0.31
SGMS1-203ENST00000429490 FEZF1A0PJY2 475 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 H7BY64 318 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 MEN1O00255 615 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 TOXO94900 526 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 NTSP30990 170 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 MGAT3Q09327 533 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 SREBF2Q12772 1141 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
SGMS1-203ENST00000429490 PLEKHS1Q5SXH7 462 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 LACC1Q8IV20 430 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 OR8J1Q8NGP2 316 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 APH1BQ8WW43 257 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 ASB15Q8WXK1 588 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 UBE2E3Q969T4 207 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 PRAP1Q96NZ9 151 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 EFCAB11Q9BUY7 163 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 CCDC32Q9BV29 185 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 PRR14Q9BWN1 585 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 ENTPD4Q9Y227 616 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 TMEM98Q9Y2Y6 226 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 SPEF1Q9Y4P9 236 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 LOC102723532A0A0G2JNH3 316 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 H3BNC9 293 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 YY2O15391 372 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 CYBAP13498 195 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 PFN3P60673 137 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 HOXC5Q00444 222 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 CDC73Q6P1J9 531 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 ARL9Q6T311 187 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 TMEM25Q86YD3 366 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 C16orf78Q8WTQ4 265 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 ING5Q8WYH8 240 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 TADA1Q96BN2 335 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 SLC6A16Q9GZN6 736 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 ASAH2Q9NR71 780 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 RB1P06400 928 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 CD9P21926 228 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 HTR3AP46098 478 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 RGS8P57771 180 aaPredicted RBP13.11□□□□□ -0.31
SGMS1-203ENST00000429490 E2F2Q14209 437 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 FNDC3BQ53EP0 1204 aaKnown RBP13.11□□□□□ -0.31
SGMS1-203ENST00000429490 ZNF385BQ569K4 471 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 RD3Q7Z3Z2 195 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 C6orf120Q7Z4R8 191 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 GLCCI1Q86VQ1 547 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 OR10H4Q8NGA5 316 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 OR4K5Q8NGD3 323 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 OR8J2Q8NGG1 315 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 NEIL3Q8TAT5 605 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 C2orf15Q8WU43 125 aaKnown RBP13.11□□□□□ -0.31
SGMS1-203ENST00000429490 JPH3Q8WXH2 748 aaPredicted RBP13.11□□□□□ -0.31
SGMS1-203ENST00000429490 TIFAQ96CG3 184 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 SLC35G5Q96KT7 338 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 ZNF717Q9BY31 904 aaPredicted RBP13.11□□□□□ -0.31
SGMS1-203ENST00000429490 MARCH5Q9NX47 278 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 GPSM3Q9Y4H4 160 aa13.11□□□□□ -0.31
SGMS1-203ENST00000429490 INMT-MINDY4F8WBC2 141 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 POP7O75817 140 aaKnown RBP13.1□□□□□ -0.31
SGMS1-203ENST00000429490 FGBP02675 491 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 F11P03951 625 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 CLTBP09497 229 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 CDH11P55287 796 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 DCDC1P59894 354 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 FKBP1BP68106 108 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 EIF4HQ15056 248 aaKnown RBP13.1□□□□□ -0.31
SGMS1-203ENST00000429490 HSDL2Q6YN16 418 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 PLEKHM3Q6ZWE6 761 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 CHCHD4Q8N4Q1 142 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 RAD51AP1Q96B01 352 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 MACROD1Q9BQ69 325 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 KLF16Q9BXK1 252 aaPredicted RBP13.1□□□□□ -0.31
SGMS1-203ENST00000429490 CHIAQ9BZP6 476 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 C11orf54Q9H0W9 315 aaPredicted RBP13.1□□□□□ -0.31
SGMS1-203ENST00000429490 RNF121Q9H920 327 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 BTNL2Q9UIR0 455 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 ING4Q9UNL4 249 aa13.1□□□□□ -0.31
SGMS1-203ENST00000429490 SNX11Q9Y5W9 270 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms