RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ANKRA2Q9H9E1 313 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 ANKHQ9HCJ1 492 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 SPAG4Q9NPE6 437 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 FGF21Q9NSA1 209 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 CUTCQ9NTM9 273 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 GPATCH2Q9NW75 528 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 TOR4AQ9NXH8 423 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 NDE1Q9NXR1 346 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 POMPQ9Y244 141 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 EML6Q6ZMW3 1958 aa8.37□□□□□ -1.07
SMC6-204ENST00000428868 DCHS1Q96JQ0 3298 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 RIF1Q5UIP0 2472 aaKnown RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 A0A1W2PRB8 838 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 MED19A0JLT2 244 aaPredicted RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 EFCAB7A8K855 629 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 MYO1GB0I1T2 1018 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 TOX3O15405 576 aaPredicted RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 ENTPD5O75356 428 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ERN1O75460 977 aaKnown RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 NSA2O95478 260 aaKnown RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 ANP32DO95626 131 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 MSL3P1P0C860 447 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 CCL4P13236 92 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 NCK1P16333 377 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ATP6V1B2P21281 511 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ME2P23368 584 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 SOAT1P35610 550 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 RPL3P39023 403 aaKnown RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 GSTM5P46439 218 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 TRPC1P48995 793 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 MVDP53602 400 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ITGA1P56199 1179 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 LIPEQ05469 1076 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ZFP36L1Q07352 338 aaKnown RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 GRM7Q14831 915 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 TCTE1Q5JU00 501 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 COX20Q5RI15 118 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 TMTC4Q5T4D3 741 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ANXA8L1Q5VT79 327 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 FBXW10Q5XX13 1052 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 PRMT9Q6P2P2 845 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 DGAT2L6Q6ZPD8 337 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 IFNEQ86WN2 208 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 CCDC116Q8IYX3 515 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 BMPERQ8N8U9 685 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 TTC29Q8NA56 475 aaPredicted RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 SLC38A9Q8NBW4 561 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 SIMC1Q8NDZ2 872 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 HIPK4Q8NE63 616 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 GOT1L1Q8NHS2 421 aaPredicted RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 FAM110BQ8TC76 370 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ZFP90Q8TF47 636 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 MMABQ96EY8 250 aaPredicted RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 ZNF764Q96H86 408 aaPredicted RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 ZNF583Q96ND8 569 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 AMDHD1Q96NU7 426 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 PHF12Q96QT6 1004 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 PRPF18Q99633 342 aaKnown RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 FAIM2Q9BWQ8 316 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ROGDIQ9GZN7 287 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 SERHL2Q9H4I8 314 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 EPS8L2Q9H6S3 715 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 LYRM4Q9HD34 91 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 SLC35C2Q9NQQ7 365 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ENAMQ9NRM1 1142 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 ATAD3AQ9NVI7 634 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 TAS2R7Q9NYW3 318 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 NDOR1Q9UHB4 597 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 EGFL7Q9UHF1 273 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 PHF11Q9UIL8 331 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 MAPRE3Q9UPY8 281 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 WBP11Q9Y2W2 641 aaKnown RBP8.36□□□□□ -1.07
SMC6-204ENST00000428868 CLDN16Q9Y5I7 305 aa8.36□□□□□ -1.07
SMC6-204ENST00000428868 EP300Q09472 2414 aaPredicted RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 PCSK5Q92824 1860 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 H0YHG0 523 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 TXNDC9O14530 226 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 ACOT8O14734 319 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 DSCR3O14972 297 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 NVLO15381 856 aaKnown RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 CDC123O75794 336 aaPredicted RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 KRT36O76013 467 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 NPPAP01160 153 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 NTRK1P04629 796 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 GP1BAP07359 652 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 NUDT7P0C024 238 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 HSD17B1P14061 328 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 PCSK2P16519 638 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 ZNF10P21506 573 aaPredicted RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 PPP2R1BP30154 601 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 ETV5P41161 510 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 BUD31P41223 144 aaPredicted RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 NCBP2P52298 156 aaKnown RBP eCLIP8.35□□□□□ -1.076e-13■■■■■ 37.3
SMC6-204ENST00000428868 EEFSECP57772 596 aaKnown RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 RPS26P62854 115 aaKnown RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 BTG2P78543 158 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 INSM1Q01101 510 aaPredicted RBP8.35□□□□□ -1.07
SMC6-204ENST00000428868 FOLH1Q04609 750 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 FAM53BQ14153 422 aa8.35□□□□□ -1.07
SMC6-204ENST00000428868 CEBPEQ15744 281 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms