RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 SIRT6Q8N6T7 355 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 ADCY4Q8NFM4 1077 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 APOBEC4Q8WW27 367 aaKnown RBP6.6□□□□□ -1.35
CDC7-203ENST00000428239 THAP4Q8WY91 577 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 TANKQ92844 425 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 DAZLQ92904 295 aaKnown RBP6.6□□□□□ -1.35
CDC7-203ENST00000428239 CRELD1Q96HD1 420 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 THOC3Q96J01 351 aaKnown RBP6.6□□□□□ -1.35
CDC7-203ENST00000428239 EGLN2Q96KS0 407 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 C3orf30Q96M34 536 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 IP6K3Q96PC2 410 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 SORT1Q99523 831 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 DEFB126Q9BYW3 111 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 TUBB1Q9H4B7 451 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 PTGFRNQ9P2B2 879 aa6.6□□□□□ -1.35
CDC7-203ENST00000428239 PTPRQQ9UMZ3 2332 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 MKRN2OSH3BPM6 223 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 PGRMC2O15173 223 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 FGF17O60258 216 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 DNAJB5O75953 348 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 ANP32DO95626 131 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 NCBP2P52298 156 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDC7-203ENST00000428239 HNRNPFP52597 415 aaKnown RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 MANFP55145 182 aaKnown RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 HSD17B7P56937 341 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 ZNF33BQ06732 778 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 R3HCC1LQ7Z5L2 792 aaKnown RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 VPS37AQ8NEZ2 397 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 OR2T11Q8NH01 316 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 RIT1Q92963 219 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 C7orf26Q96N11 449 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 ELAC2Q9BQ52 826 aaKnown RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 DDX31Q9H8H2 851 aaKnown RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 CLK4Q9HAZ1 481 aaKnown RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 ADAP2Q9NPF8 381 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 DDX18Q9NVP1 670 aaKnown RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 ABI3Q9P2A4 366 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 TRIM33Q9UPN9 1127 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 MMACHCQ9Y4U1 282 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 VGLL3A8MV65 326 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 CTNSO60931 367 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 CPSF4O95639 269 aaKnown RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 G6PDP11413 515 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 BCKDHAP12694 445 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 WT1P19544 449 aaPredicted RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 CSNK2A2P19784 350 aaPredicted RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 DIO3P55073 304 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 ZNF750Q32MQ0 723 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 CPTPQ5TA50 214 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 TMEM198Q66K66 360 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 CPZQ66K79 652 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 FCRLBQ6BAA4 426 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 MRPL14Q6P1L8 145 aaKnown RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 BORAQ6PGQ7 559 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 DNAJC14Q6Y2X3 702 aaPredicted RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 Q6ZSR9 355 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 TRIM46Q7Z4K8 759 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 LRRC34Q8IZ02 419 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 FAM9CQ8IZT9 166 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 CHTF18Q8WVB6 975 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 MESP1Q9BRJ9 268 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 AICDAQ9GZX7 198 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 EQTNQ9NQ60 294 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 NECTIN3Q9NQS3 549 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 ZNF71Q9NQZ8 489 aaPredicted RBP6.59□□□□□ -1.35
CDC7-203ENST00000428239 ATAD3AQ9NVI7 634 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 ADAM29Q9UKF5 820 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 ACSL6Q9UKU0 697 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 TMED5Q9Y3A6 229 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 HS3ST3B1Q9Y662 390 aa6.59□□□□□ -1.35
CDC7-203ENST00000428239 H3BMH7 237 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 LSM1O15116 133 aaKnown RBP6.58□□□□□ -1.36
CDC7-203ENST00000428239 CNOT3O75175 753 aaKnown RBP6.58□□□□□ -1.36
CDC7-203ENST00000428239 KLF7O75840 302 aaPredicted RBP6.58□□□□□ -1.36
CDC7-203ENST00000428239 GPR75O95800 540 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 PRPS2P11908 318 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 TACR1P25103 407 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 S100A3P33764 101 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 MPIP34949 423 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 RPL3P39023 403 aaKnown RBP6.58□□□□□ -1.36
CDC7-203ENST00000428239 SEC24CP53992 1094 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 ERVK-8P63133 956 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 TBL3Q12788 808 aaKnown RBP6.58□□□□□ -1.36
CDC7-203ENST00000428239 SLC9B1Q4ZJI4 515 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 ABHD17BQ5VST6 288 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 CES4AQ5XG92 561 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 ZNF385CQ66K41 422 aaPredicted RBP6.58□□□□□ -1.36
CDC7-203ENST00000428239 GALNT12Q8IXK2 581 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 TMEM156Q8N614 296 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 TMEM102Q8N9M5 508 aaPredicted RBP6.58□□□□□ -1.36
CDC7-203ENST00000428239 TMEM52Q8NDY8 209 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 ZFP28Q8NHY6 868 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 SLC25A23Q9BV35 468 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.58□□□□□ -1.36
CDC7-203ENST00000428239 DKK4Q9UBT3 224 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 ERVK-11Q9UQG0 969 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 ERVK-19Q9WJR5 959 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 CELSR3Q9NYQ7 3312 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 FRYQ5TBA9 3013 aa6.58□□□□□ -1.36
CDC7-203ENST00000428239 A0A0A6YYD5 115 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms