RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 A0A0A6YYD5 115 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 ARHGAP10A1A4S6 786 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 TMPRSS11DO60235 418 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 HS6ST1O60243 411 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 CDC40O60508 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 SMIM24O75264 130 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 CLDN9O95484 217 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 GBAP04062 536 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 TUBB4AP04350 444 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 ESRRAP11474 423 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 COX7A2P14406 83 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 PTX3P26022 381 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 GRNP28799 593 aaKnown RBP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 BSGP35613 385 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 STT3AP46977 705 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 CCNG1P51959 295 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 RNF4P78317 190 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 IGLV3-21P80748 117 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 ADORA2A-AS1P86434 159 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 TSNAXIP1Q2TAA8 658 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 METTL2BQ6P1Q9 378 aaKnown RBP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 MTFR2Q6P444 385 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 DGAT2L6Q6ZPD8 337 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 RPS27LQ71UM5 84 aaKnown RBP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 FGD2Q7Z6J4 655 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 CHERPQ8IWX8 916 aaKnown RBP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 ZNF808Q8N4W9 903 aaPredicted RBP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 ZNF721Q8TF20 911 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 PPWD1Q96BP3 646 aaKnown RBP17.07■□□□□ 0.32
PSPC1-202ENST00000427943 MS4A12Q9NXJ0 267 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 ZNF180Q9UJW8 692 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 NFU1Q9UMS0 254 aa17.07■□□□□ 0.32
PSPC1-202ENST00000427943 EXPH5Q8NEV8 1989 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 NCKAP5O14513 1909 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 A0A0G2JMM0 328 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 EXOC1LA0A1B0GW35 172 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 A0A1W2PPB8 328 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 A0A1W2PRS3 328 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 PINLYPA6NC86 204 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 GLOD5A6NK44 160 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 WASHC1A8K0Z3 465 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 KIR3DP1A8MWS1 328 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 G3V3Y1 287 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 STX16-NPEPL1H3BU86 382 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 HRKO00198 91 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 STX16O14662 325 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 ZNF354AO60765 605 aaPredicted RBP17.06■□□□□ 0.32
PSPC1-202ENST00000427943 BUD31P41223 144 aaPredicted RBP17.06■□□□□ 0.32
PSPC1-202ENST00000427943 PLIN5Q00G26 463 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 TRAF3Q13114 568 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 CUL3Q13618 768 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 FAM219BQ5XKK7 198 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 CYP20A1Q6UW02 462 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 RPTNQ6XPR3 784 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 C3P1Q6ZMU1 363 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 GPALPP1Q8IXQ4 340 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 ZBTB26Q9HCK0 441 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 SEMA4BQ9NPR2 832 aaPredicted RBP17.06■□□□□ 0.32
PSPC1-202ENST00000427943 LYARQ9NX58 379 aaKnown RBP17.06■□□□□ 0.32
PSPC1-202ENST00000427943 TMCO1Q9UM00 188 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 ASB4Q9Y574 426 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 DNAJC13O75165 2243 aa17.06■□□□□ 0.32
PSPC1-202ENST00000427943 A0A1W2PR48 441 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 FOXE1O00358 373 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 PROM1O43490 865 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 FAM58BPP0C7Q3 252 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 NR2F6P10588 404 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 COL6A2P12110 1019 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 ALOX15P16050 662 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 CNTFP26441 200 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 TLX1P31314 330 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 ARFIP1P53367 373 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 ART3Q13508 389 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 ZNF750Q32MQ0 723 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 CMPK2Q5EBM0 449 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 SP5Q6BEB4 398 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 TTC19Q6DKK2 380 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 MRM1Q6IN84 353 aaKnown RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 NUDT13Q86X67 352 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 C9orf40Q8IXQ3 194 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 ZFP62Q8NB50 900 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 OR8K3Q8NH51 312 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 C16orf52Q8NHV5 167 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 KIF18AQ8NI77 898 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 AGAP11Q8TF27 550 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 TANKQ92844 425 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 UCN3Q969E3 161 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 MARVELD3Q96A59 401 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 SENP5Q96HI0 755 aaPredicted RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 NTMT1Q9BV86 223 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 CNPPD1Q9BV87 410 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 MRPL46Q9H2W6 279 aaKnown RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 DDX31Q9H8H2 851 aaKnown RBP17.05■□□□□ 0.32
PSPC1-202ENST00000427943 ENTPD4Q9Y227 616 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 MEMO1Q9Y316 297 aa17.05■□□□□ 0.32
PSPC1-202ENST00000427943 A0A1B0GTH9 108 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 A0A1B0GTL3 188 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 FAM166BA8MTA8 275 aa17.04■□□□□ 0.32
PSPC1-202ENST00000427943 KIF2AO00139 706 aaPredicted RBP17.04■□□□□ 0.32
PSPC1-202ENST00000427943 AIFM1O95831 613 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms