RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 MSH2P43246 934 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 HNMTP50135 292 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 PPP2R2BQ00005 443 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 SORDQ00796 357 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 CRYMQ14894 314 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 ABHD17CQ6PCB6 329 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 POMZP3Q6PJE2 187 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 SBSNQ6UWP8 590 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 SLCO4C1Q6ZQN7 724 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 KRTAP1-3Q8IUG1 177 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 SLC15A4Q8N697 577 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 C7orf57Q8NEG2 295 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 SPATA3Q8NHX4 192 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 NUBPLQ8TB37 319 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 MAGOHBQ96A72 148 aaKnown RBP13.47□□□□□ -0.25
PDAP1-202ENST00000426447 SPACA9Q96E40 222 aaPredicted RBP13.47□□□□□ -0.25
PDAP1-202ENST00000426447 SENP5Q96HI0 755 aaPredicted RBP13.47□□□□□ -0.25
PDAP1-202ENST00000426447 DGAT2Q96PD7 388 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 TRIB1Q96RU8 372 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 DOHHQ9BU89 302 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 CAPS2Q9BXY5 557 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 IKZF3Q9UKT9 509 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 CAMK2AQ9UQM7 478 aa13.47□□□□□ -0.25
PDAP1-202ENST00000426447 LRRC3CA6NJW4 275 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 H7C1Q1 480 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 CDC7O00311 574 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 SMPD2O60906 423 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 LRATO95237 230 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 HRGP04196 525 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 MAGEA3P43357 314 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 RPL21P46778 160 aaKnown RBP13.46□□□□□ -0.25
PDAP1-202ENST00000426447 Q5PR19 223 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 NSUN5P2Q63ZY6 315 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 FAM45BPQ6NSW5 357 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 ADGRD1Q6QNK2 874 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 FRA10AC1Q70Z53 315 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 DND1Q8IYX4 353 aaKnown RBP13.46□□□□□ -0.25
PDAP1-202ENST00000426447 FAM45AQ8TCE6 357 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 RBM18Q96H35 190 aaKnown RBP13.46□□□□□ -0.25
PDAP1-202ENST00000426447 PDLIM5Q96HC4 596 aaKnown RBP13.46□□□□□ -0.25
PDAP1-202ENST00000426447 F2RL3Q96RI0 385 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 BDH2Q9BUT1 245 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 ROGDIQ9GZN7 287 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 NT5DC2Q9H857 520 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 LYRM4Q9HD34 91 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 SH2D2AQ9NP31 389 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 EIF3LQ9Y262 564 aaKnown RBP13.46□□□□□ -0.25
PDAP1-202ENST00000426447 VPS13CQ709C8 3753 aa13.46□□□□□ -0.25
PDAP1-202ENST00000426447 IQANK1A0A1B0GTG1 560 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 NPEPPSL1A6NEC2 478 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 CLGNO14967 610 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 ACSL3O95573 720 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 TTC4O95801 387 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 C1QAP02745 245 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 KCNC1P48547 511 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 CRYZQ08257 329 aaKnown RBP13.45□□□□□ -0.26
PDAP1-202ENST00000426447 TOMM20Q15388 145 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 PPP1R3AQ16821 1122 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 C18orf21Q32NC0 220 aaPredicted RBP13.45□□□□□ -0.26
PDAP1-202ENST00000426447 ADPRMQ3LIE5 342 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 SPANXN3Q5MJ09 141 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 TTC27Q6P3X3 843 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 CXXC5Q7LFL8 322 aaKnown RBP13.45□□□□□ -0.26
PDAP1-202ENST00000426447 OR4N5Q8IXE1 308 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 C9orf40Q8IXQ3 194 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 CIARTQ8N365 385 aaPredicted RBP13.45□□□□□ -0.26
PDAP1-202ENST00000426447 NAT8LQ8N9F0 302 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 SIMC1Q8NDZ2 872 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 OR10G3Q8NGC4 313 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 DIO2Q92813 273 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 PPWD1Q96BP3 646 aaKnown RBP13.45□□□□□ -0.26
PDAP1-202ENST00000426447 COX4I2Q96KJ9 171 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 ART5Q96L15 291 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 ZNF597Q96LX8 424 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 DACH2Q96NX9 599 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 KCNC2Q96PR1 638 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 GAL3ST4Q96RP7 486 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 MAPKAP1Q9BPZ7 522 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 RBM24Q9BX46 236 aaKnown RBP13.45□□□□□ -0.26
PDAP1-202ENST00000426447 PITHD1Q9GZP4 211 aaPredicted RBP13.45□□□□□ -0.26
PDAP1-202ENST00000426447 PROK2Q9HC23 129 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 PRDM7Q9NQW5 492 aa13.45□□□□□ -0.26
PDAP1-202ENST00000426447 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.45□□□□□ -0.26
PDAP1-202ENST00000426447 CORO1CQ9ULV4 474 aaPredicted RBP13.45□□□□□ -0.26
PDAP1-202ENST00000426447 ERN1O75460 977 aaKnown RBP13.44□□□□□ -0.26
PDAP1-202ENST00000426447 CPN2P22792 545 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 STT3AP46977 705 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 CPA2P48052 419 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 CDKL1Q00532 357 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 LYPD8Q6UX82 237 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 CAPN12Q6ZSI9 719 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 SYDE1Q6ZW31 735 aaPredicted RBP13.44□□□□□ -0.26
PDAP1-202ENST00000426447 SLC29A4Q7RTT9 530 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 CXorf67Q86X51 503 aaPredicted RBP13.44□□□□□ -0.26
PDAP1-202ENST00000426447 CNTN4Q8IWV2 1026 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 PPIL6Q8IXY8 311 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 NKAPQ8N5F7 415 aaKnown RBP13.44□□□□□ -0.26
PDAP1-202ENST00000426447 SRFBP1Q8NEF9 429 aaKnown RBP13.44□□□□□ -0.26
PDAP1-202ENST00000426447 ZNF592Q92610 1267 aa13.44□□□□□ -0.26
PDAP1-202ENST00000426447 PIGTQ969N2 578 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms