RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 RDH10Q8IZV5 341 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 OR4M2Q8NGB6 313 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 LRRC20Q8TCA0 184 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 TBC1D20Q96BZ9 403 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 HDHD2Q9H0R4 259 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 ATP13A2Q9NQ11 1180 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 STUB1Q9UNE7 303 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 KCNE1BA0A087WTH5 132 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 TMEM202A6NGA9 273 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 PRRG1O14668 218 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 INPPL1O15357 1258 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 FABP7O15540 132 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 TOXO94900 526 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 TGFB1P01137 390 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 C1SP09871 688 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 EIF4HQ15056 248 aaKnown RBP12.85□□□□□ -0.35
LRCH3-203ENST00000425562 MTFR2Q6P444 385 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 CSGALNACT1Q8TDX6 532 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 KLHL6Q8WZ60 621 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 QRFPRQ96P65 431 aa12.85□□□□□ -0.35
LRCH3-203ENST00000425562 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
LRCH3-203ENST00000425562 FRMPD3Q5JV73 1810 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 NPIPB15A6NHN6 443 aaPredicted RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 PCP4L1A6NKN8 68 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 FADS2P1A8MWK0 482 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 SCAMP2O15127 329 aaKnown RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 POLR1CO15160 346 aaPredicted RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 OPRD1P41143 372 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 CTSOP43234 321 aaPredicted RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 LIM2P55344 173 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 CDK6Q00534 326 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 B4GALNT1Q00973 533 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 TLE2Q04725 743 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 MTAPQ13126 283 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 TARDBPQ13148 414 aaKnown RBP eCLIP12.84□□□□□ -0.352e-7■■■■■ 31.2
LRCH3-203ENST00000425562 ASAH1Q13510 395 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 POM121L1PQ3SYA9 428 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 SPOUT1Q5T280 376 aaKnown RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 CASP12Q6UXS9 341 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 POF1BQ8WVV4 589 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 TMEM80Q96HE8 168 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 DHRS9Q9BPW9 319 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 PRR14Q9BWN1 585 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 VN1R3Q9BXE9 311 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 OR51B5Q9H339 312 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 DNAJC11Q9NVH1 559 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 SATB2Q9UPW6 733 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 FFAR1O14842 300 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 RPS5P46782 204 aaKnown RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 PREPP48147 710 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 SRP54P61011 504 aaKnown RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 RPS13P62277 151 aaKnown RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 VEZF1Q14119 521 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 UNC5DQ6UXZ4 953 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 CERS6Q6ZMG9 384 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 SLC30A8Q8IWU4 369 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 NXPE1Q8N323 547 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 TMEM145Q8NBT3 493 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 FAM46DQ8NEK8 389 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 VPS37AQ8NEZ2 397 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 BEST4Q8NFU0 473 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 SLC25A46Q96AG3 418 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 PIP5K1AQ99755 562 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 GON7Q9BXV9 100 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 ING3Q9NXR8 418 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 ASIC5Q9NY37 505 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 IL20RAQ9UHF4 553 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 A0A1W2PQ45 241 aaPredicted RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 A0A1W2PQY0 241 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 NUPL2O15504 423 aaKnown RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 HRO43593 1189 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 CH25HO95992 272 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 CSTF2P33240 577 aaKnown RBP eCLIP12.84□□□□□ -0.352e-7■■■■□ 24.2
LRCH3-203ENST00000425562 MLLT3P42568 568 aaPredicted RBP12.84□□□□□ -0.35
LRCH3-203ENST00000425562 GCNT6Q5T4J0 391 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 BCL2L15Q5TBC7 163 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 DNAJB8Q8NHS0 232 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 TM9SF4Q92544 642 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 SCAMP4Q969E2 229 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 KATNB1Q9BVA0 655 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 ZNF224Q9NZL3 707 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 SEC14L4Q9UDX3 406 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 FTSJ1Q9UET6 329 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 ITM2BQ9Y287 266 aa12.84□□□□□ -0.35
LRCH3-203ENST00000425562 C1orf226A1L170 272 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 HYKKA2RU49 373 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 LYRM1O43325 122 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 PRKYO43930 277 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 ARSBP15848 533 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 CSTF1Q05048 431 aaKnown RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 FGFBP1Q14512 234 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 CLEC12AQ5QGZ9 265 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 XKRXQ6PP77 449 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 CEACAM20Q6UY09 585 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 KRT74Q7RTS7 529 aa12.83□□□□□ -0.36
LRCH3-203ENST00000425562 C9orf43Q8TAL5 461 aaPredicted RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 MAGEB10Q96LZ2 347 aaPredicted RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 FAM120CQ9NX05 1096 aaKnown RBP12.83□□□□□ -0.36
LRCH3-203ENST00000425562 CD8B2A6NJW9 211 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms