RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RCAN2Q14206 197 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MORF4L2Q15014 288 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TGFBIQ15582 683 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PDK4Q16654 411 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ADPRMQ3LIE5 342 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 EEF1A1P5Q5VTE0 462 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SYDE1Q6ZW31 735 aaPredicted RBP11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LIX1LQ8IVB5 337 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ULK2Q8IYT8 1036 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ACTRT1Q8TDG2 376 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PAQR8Q8TEZ7 354 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 RHBDF1Q96CC6 855 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CMTM7Q96FZ5 175 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 F2RL3Q96RI0 385 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PHF11Q9UIL8 331 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 HEATR5BQ9P2D3 2071 aa11.32□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SCN3AQ9NY46 2000 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 OR6C76A6NM76 312 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CCNT2O60583 730 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CCL3P10147 92 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PCNAP12004 261 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 STT3AP46977 705 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 POU4F1Q01851 419 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 FOXD4Q12950 439 aaPredicted RBP11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PPP1R3AQ16821 1122 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DEFB113Q30KQ7 82 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 RTL6Q6ICC9 239 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MED27Q6P2C8 311 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 RNF111Q6ZNA4 994 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ACOT4Q8N9L9 421 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZNF721Q8TF20 911 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SREK1Q8WXA9 508 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DIO2Q92813 273 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 RGMAQ96B86 450 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SPACA9Q96E40 222 aaPredicted RBP11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MS4A14Q96JA4 679 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 C18orf12Q96KH6 178 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZNF597Q96LX8 424 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CNPPD1Q9BV87 410 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DERL2Q9GZP9 239 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 RPF2Q9H7B2 306 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PRDM7Q9NQW5 492 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZNF358Q9NW07 568 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 NDRG3Q9UGV2 375 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CHMP2BQ9UQN3 213 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 EIF3LQ9Y262 564 aaKnown RBP11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ANGPTL3Q9Y5C1 460 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LIPGQ9Y5X9 500 aa11.31□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MYOCOSA0A1B0GUC4 107 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ERN1O75460 977 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ALOX15P16050 662 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 HIST1H1TP22492 207 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ATP5A1P25705 553 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 GGT5P36269 586 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ADH7P40394 386 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TRPC1P48995 793 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PCDH1Q08174 1060 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 FOXO1Q12778 655 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CHIT1Q13231 466 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SLAMF1Q13291 335 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DOC2AQ14183 400 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 FRG1Q14331 258 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TSNQ15631 228 aaKnown RBP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ZNF791Q3KP31 576 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 HP1BP3Q5SSJ5 553 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SHEQ5VZ18 495 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 OR4C11Q6IEV9 310 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 GPR180Q86V85 440 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MMP21Q8N119 569 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 AGGF1Q8N302 714 aaeCLIP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LRRC25Q8N386 305 aaPredicted RBP11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TMEM52Q8NDY8 209 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 REPS1Q96D71 796 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 GAL3ST4Q96RP7 486 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 MAPKAP1Q9BPZ7 522 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SNX15Q9NRS6 342 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 RNF112Q9ULX5 631 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CAMK2AQ9UQM7 478 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 PPP2R2CQ9Y2T4 447 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 GTF3C1Q12789 2109 aa11.3□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CCDC168Q8NDH2 2452 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 C2orf92A0A1B0GVN3 265 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ANKRD33BA6NCL7 494 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TGFB1P01137 390 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 C1QAP02745 245 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CELA3AP09093 270 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 STMN1P16949 149 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 HOXB4P17483 251 aaPredicted RBP11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TACR1P25103 407 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 CTSSP25774 331 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SLC6A12P48065 614 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 HSPA7P48741 367 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 HNRNPFP52597 415 aaKnown RBP11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DIO3P55073 304 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 TAS2R39P59534 338 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 ADAM8P78325 824 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 SORDQ00796 357 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 LTBQ06643 244 aa11.29□□□□□ -0.6
HLA-DQB3-203ENST00000425319 DUSP8Q13202 625 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms