RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PIF1Q9H611 641 aa12.64□□□□□ -0.39
PRPF39-202ENST00000424478 MAP4K5Q9Y4K4 846 aa12.64□□□□□ -0.39
PRPF39-202ENST00000424478 PCDHB3Q9Y5E6 796 aa12.64□□□□□ -0.39
PRPF39-202ENST00000424478 HRKO00198 91 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 FHP07954 510 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 ATP4BP51164 291 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 RAB38P57729 211 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 DCDP81605 110 aaKnown RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 MXRA7P84157 204 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 MAP7Q14244 749 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 SMU1Q2TAY7 513 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 SLC48A1Q6P1K1 146 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 WDR53Q7Z5U6 358 aaPredicted RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 ZC3H7AQ8IWR0 971 aaKnown RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 RNF148Q8N7C7 305 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 LYARQ9NX58 379 aaKnown RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 SRPK3Q9UPE1 567 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 SNX8Q9Y5X2 465 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 MRPS18BQ9Y676 258 aaKnown RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 ANGPT2O15123 496 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 CDK9P50750 372 aaKnown RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 XKP51811 444 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 TLR1Q15399 786 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 OR9A2Q8NGT5 310 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 ANKRD9Q96BM1 317 aaPredicted RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 C8orf44Q96CB5 159 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 PTCHD1Q96NR3 888 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 LANCL2Q9NS86 450 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 AK5Q9Y6K8 562 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 H0YIG0 161 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 MRASO14807 208 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 SCN2BO60939 215 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 SORBS2O94875 1100 aaKnown RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 TSFMP43897 325 aaKnown RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 HBA1P69905 142 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 PDE7AQ13946 482 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 FBXO30Q8TB52 745 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 STON2Q8WXE9 905 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 FAM122AQ96E09 287 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 NSL1Q96IY1 281 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 METTL2AQ96IZ6 378 aaKnown RBP12.63□□□□□ -0.39
PRPF39-202ENST00000424478 FAIM2Q9BWQ8 316 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 ROGDIQ9GZN7 287 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 SERHLQ9NQF3 203 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 SLC35C2Q9NQQ7 365 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 TAGLN3Q9UI15 199 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 PHF11Q9UIL8 331 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 NDUFAF1Q9Y375 327 aa12.63□□□□□ -0.39
PRPF39-202ENST00000424478 DSPP15924 2871 aaKnown RBP12.62□□□□□ -0.39
PRPF39-202ENST00000424478 C1orf226A1L170 272 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 B2RBV5 119 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 F8A1P23610 371 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 MSX2P35548 267 aaPredicted RBP12.62□□□□□ -0.39
PRPF39-202ENST00000424478 ST13P50502 369 aaKnown RBP12.62□□□□□ -0.39
PRPF39-202ENST00000424478 NCBP2P52298 156 aaKnown RBP eCLIP12.62□□□□□ -0.395e-8■■■□□ 16
PRPF39-202ENST00000424478 GAB1Q13480 694 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 MAPKAPK3Q16644 382 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 TMPRSS7Q7RTY8 843 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 SUN3Q8TAQ9 357 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 BBS4Q96RK4 519 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 SCNM1Q9BWG6 230 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 GLIPR2Q9H4G4 154 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 LYRM4Q9HD34 91 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 PRTFDC1Q9NRG1 225 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 CLDN16Q9Y5I7 305 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 ATMQ13315 3056 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 A0A1W2PP18 115 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 RRP9O43818 475 aaKnown RBP12.62□□□□□ -0.39
PRPF39-202ENST00000424478 ALOX12BO75342 701 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 ZGLP1P0C6A0 271 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 SOAT1P35610 550 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 FAM111BQ6SJ93 734 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 C10orf111Q8N326 155 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 RBM15BQ8NDT2 890 aaKnown RBP12.62□□□□□ -0.39
PRPF39-202ENST00000424478 SLC46A1Q96NT5 459 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 RTKNQ9BST9 563 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 VN1R1Q9GZP7 353 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 POLR1BQ9H9Y6 1135 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 WDR41Q9HAD4 459 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 ZNF282Q9UDV7 671 aaPredicted RBP12.62□□□□□ -0.39
PRPF39-202ENST00000424478 ATP6V1HQ9UI12 483 aa12.62□□□□□ -0.39
PRPF39-202ENST00000424478 PDPK1O15530 556 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 TCN2P20062 427 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 TLX1P31314 330 aaPredicted RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 ERFP50548 548 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 MANFP55145 182 aaKnown RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 RPS26P62854 115 aaKnown RBP12.61□□□□□ -0.39
PRPF39-202ENST00000424478 SELPLGQ14242 412 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 NKG7Q16617 165 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 TMEM107Q6UX40 140 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 CCDC121Q6ZUS5 278 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 GTF2H4Q92759 462 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 TESCQ96BS2 214 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 CLPTM1LQ96KA5 538 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 PANX1Q96RD7 426 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 ASPSCR1Q9BZE9 553 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 IKZF5Q9H5V7 419 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 VAPAQ9P0L0 249 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 CDC14AQ9UNH5 594 aa12.61□□□□□ -0.39
PRPF39-202ENST00000424478 USP22Q9UPT9 525 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms