RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ZAR1LA6NP61 321 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 B4DXG7 233 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 OPRD1P41143 372 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 XCR1P46094 333 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 PRIM2P49643 509 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 STK19P49842 368 aaPredicted RBP13.66□□□□□ -0.22
MSH5-206ENST00000423982 RORCP51449 518 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 CRISP1P54107 249 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 ARPC4P59998 168 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 AP1S1P61966 158 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 SNRPD2P62316 118 aaKnown RBP13.66□□□□□ -0.22
MSH5-206ENST00000423982 CHRNEQ04844 493 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 NAE1Q13564 534 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 GPR33Q49SQ1 333 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 RFPL4BQ6ZWI9 263 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 THOC6Q86W42 341 aaKnown RBP13.66□□□□□ -0.22
MSH5-206ENST00000423982 LAS2Q8IYD9 372 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 MMP21Q8N119 569 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 HJURPQ8NCD3 748 aaPredicted RBP13.66□□□□□ -0.22
MSH5-206ENST00000423982 SLC6A18Q96N87 628 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 RSPO3Q9BXY4 272 aaPredicted RBP13.66□□□□□ -0.22
MSH5-206ENST00000423982 RPRD1BQ9NQG5 326 aaKnown RBP13.66□□□□□ -0.22
MSH5-206ENST00000423982 DENND4CQ5VZ89 1909 aa13.66□□□□□ -0.22
MSH5-206ENST00000423982 OR2AG2A6NM03 316 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 SMLR1H3BR10 107 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 SOX1O00570 391 aaPredicted RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 FFAR1O14842 300 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 KIR2DL3P43628 341 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 PTSQ03393 145 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 LARS2Q15031 903 aaKnown RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 SPHARQ15513 63 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 SLC5A12Q1EHB4 618 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 MPEG1Q2M385 716 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 YIF1BQ5BJH7 314 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 RPS26P11Q5JNZ5 115 aaPredicted RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 FAM78AQ5JUQ0 283 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 ERAP2Q6P179 960 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 SYT14Q8NB59 555 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 SIMC1Q8NDZ2 872 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 C9orf43Q8TAL5 461 aaPredicted RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 JPH3Q8WXH2 748 aaPredicted RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 PIP5K1AQ99755 562 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 POLR2J2Q9GZM3 115 aaKnown RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 MALT1Q9UDY8 824 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 ZNF106Q9H2Y7 1883 aaKnown RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 OR6C70A6NIJ9 312 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 NPIPB8E9PQR5 432 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 ZNF197O14709 1029 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 KPNA5O15131 536 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 PRMT3O60678 531 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 ZNF821O75541 412 aaPredicted RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 CBSLP0DN79 551 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 MYL9P24844 172 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 CBSP35520 551 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 LIM2P55344 173 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 RPS13P62277 151 aaKnown RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 RPS26P62854 115 aaKnown RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 HNRNPA0Q13151 305 aaKnown RBP13.65□□□□□ -0.22
MSH5-206ENST00000423982 SEC23BQ15437 767 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 TEAD4Q15561 434 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 MPPE1Q53F39 396 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 GCNT6Q5T4J0 391 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 C22orf42Q6IC83 251 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 OR9Q1Q8NGQ5 310 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 HUS1BQ8NHY5 278 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 SETD6Q8TBK2 473 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 BTNL2Q9UIR0 455 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 CMAHPQ9Y471 501 aa13.65□□□□□ -0.22
MSH5-206ENST00000423982 A0A1W2PQL4 384 aaPredicted RBP13.64□□□□□ -0.23
MSH5-206ENST00000423982 TRBC2A0A5B9 178 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 CCDC182A6NF36 153 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 AGAP14A8MT82 685 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 AKR7A2O43488 359 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 SEMA7AO75326 666 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 AP2A2O94973 939 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 C8GP07360 202 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 HTR2BP41595 481 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 CTSOP43234 321 aaPredicted RBP13.64□□□□□ -0.23
MSH5-206ENST00000423982 LIMS1P48059 325 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 TSTA3Q13630 321 aaPredicted RBP13.64□□□□□ -0.23
MSH5-206ENST00000423982 FLYWCH1Q4VC44 716 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 LY6G5CQ5SRR4 150 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 LYPLAL1Q5VWZ2 237 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 TTC23LQ6PF05 361 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 HTR3DQ70Z44 454 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 IQCF1Q8N6M8 205 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 VPS37AQ8NEZ2 397 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 SCAMP4Q969E2 229 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 VOPP1Q96AW1 172 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 DIRAS2Q96HU8 199 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 WFDC6Q9BQY6 131 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 TRPV5Q9NQA5 729 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 CLEC1BQ9P126 229 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 ARHGEF33A8MVX0 844 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 GFYI3L273 518 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 TLR4O00206 839 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 PLA2G10O15496 165 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 TMCC2O75069 709 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 OR56A5P0C7T3 313 aa13.64□□□□□ -0.23
MSH5-206ENST00000423982 MSL3P1P0C860 447 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms