RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 OPRM1P35372 400 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 VPS41P49754 854 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 PLA2G16P53816 162 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 MTTPP55157 894 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 PPP1R3AQ16821 1122 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 Q5PR19 223 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 ABHD17CQ6PCB6 329 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 SLCO4C1Q6ZQN7 724 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 P3H2Q8IVL5 708 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 PM20D2Q8IYS1 436 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 SLC22A8Q8TCC7 542 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 SPACA9Q96E40 222 aaPredicted RBP15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 BDH2Q9BUT1 245 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 REXO4Q9GZR2 422 aaKnown RBP15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 COPS7AQ9UBW8 275 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 IKZF3Q9UKT9 509 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 CHCHD2Q9Y6H1 151 aaPredicted RBP15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 IKBKGQ9Y6K9 419 aa15.37■□□□□ 0.05
CHCHD3-202ENST00000423635 MBD3L4A6NDZ8 208 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 MBD3L3A6NE82 208 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 MBD3L5A6NJ08 208 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 GOLGA8MH3BSY2 632 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 H7C1Q1 480 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 KRT14P02533 472 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 CCDC175P0C221 793 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 GNAZP19086 355 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 TRPC1P48995 793 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 PDAP1Q13442 181 aaKnown RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 PRAMEF20Q5VT98 475 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 TRIM40Q6P9F5 258 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 GALNT7Q86SF2 657 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 CNTN4Q8IWV2 1026 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 MBD3L2Q8NHZ7 208 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 GABPB2Q8TAK5 448 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 ZNF592Q92610 1267 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 ISL2Q96A47 359 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 SENP5Q96HI0 755 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 WDR83Q9BRX9 315 aaKnown RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 PITHD1Q9GZP4 211 aaPredicted RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 LYRM4Q9HD34 91 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 PRDM7Q9NQW5 492 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 ADAM21Q9UKJ8 722 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 CNOT11Q9UKZ1 510 aaKnown RBP15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 NINQ8N4C6 2090 aa15.36■□□□□ 0.05
CHCHD3-202ENST00000423635 ARID1AO14497 2285 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 ATRQ13535 2644 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 FREM3P0C091 2139 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 TLN2Q9Y4G6 2542 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 C15orf38-AP3S2A0A0A6YYH1 394 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 ANKRD33BA6NCL7 494 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 LDB3O75112 727 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 IGKV3-11P04433 115 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 CERS1P27544 350 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 ZNF75DP51815 510 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 AGFG1P52594 562 aaKnown RBP15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 PGGT1BP53609 377 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 CDKL1Q00532 357 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 POU4F3Q15319 338 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 NHSL2Q5HYW2 709 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 VASNQ6EMK4 673 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 VN1R5Q7Z5H4 357 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 C9orf40Q8IXQ3 194 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 CCT6BQ92526 530 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 ANKRD7Q92527 254 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 PIGTQ969N2 578 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 ANKRD9Q96BM1 317 aaPredicted RBP15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 RUNDC3BQ96NL0 473 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 CALHM2Q9HA72 323 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 VWA7Q9Y334 891 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 ZANQ9Y493 2812 aa15.35■□□□□ 0.05
CHCHD3-202ENST00000423635 KIAA1549Q9HCM3 1950 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 ANKDD1BA6NHY2 528 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 INAFM1C9JVW0 142 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 CES2O00748 559 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 SMPD2O60906 423 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 TRIM3O75382 744 aaPredicted RBP15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 HPNP05981 417 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 FBXO45P0C2W1 286 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 SERPINB3P29508 390 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 HNMTP50135 292 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 SLBPQ14493 270 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 SYDE1Q6ZW31 735 aaPredicted RBP15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 KRT78Q8N1N4 520 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 OR10G3Q8NGC4 313 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 Q96MF0 132 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 JSRP1Q96MG2 331 aaPredicted RBP15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 GUCA1BQ9UMX6 200 aa15.34■□□□□ 0.05
CHCHD3-202ENST00000423635 STAB1Q9NY15 2570 aa15.33■□□□□ 0.05
CHCHD3-202ENST00000423635 EEF1E1-BLOC1S5C9J1V9 151 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 EEF1E1O43324 174 aaKnown RBP15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 PGAM1P18669 254 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 GDF1P27539 372 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 STT3AP46977 705 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 SLC6A12P48065 614 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 IGLV3-21P80748 117 aaPredicted RBP15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 PPP2R2BQ00005 443 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 BIKQ13323 160 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 CRYMQ14894 314 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 TBCELQ5QJ74 424 aa15.33■□□□□ 0.04
CHCHD3-202ENST00000423635 VWA5B2Q8N398 1253 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms