RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 NEURL3Q96EH8 262 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 ZNF681Q96N22 645 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 CIB1Q99828 191 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 UGT2B28Q9BY64 529 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 LRIT1Q9P2V4 623 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 MAP4K5Q9Y4K4 846 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 SNX8Q9Y5X2 465 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 CACNA1EQ15878 2313 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 CKMT2P17540 419 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 GABRA4P48169 554 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 EPHA4P54764 986 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 LIM2P55344 173 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 EEF1A2Q05639 463 aaKnown RBP19.8■□□□□ 0.76
GPC1-202ENST00000420138 VAC14Q08AM6 782 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 FADDQ13158 208 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 BIRC2Q13490 618 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 MAP7Q14244 749 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 ATP6AP1Q15904 470 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 PPP4R4Q6NUP7 873 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 GALNT10Q86SR1 603 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 EPHX4Q8IUS5 362 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 ARL10Q8N8L6 244 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 SLC29A1Q99808 456 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 NLNQ9BYT8 704 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 RAB33BQ9H082 229 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 STARD5Q9NSY2 213 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 DAPP1Q9UN19 280 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 AK5Q9Y6K8 562 aa19.8■□□□□ 0.76
GPC1-202ENST00000420138 C7orf72A4D263 438 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 KRT75O95678 551 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 PCGF2P35227 344 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 CHI3L1P36222 383 aaPredicted RBP19.79■□□□□ 0.76
GPC1-202ENST00000420138 CLCN2P51788 898 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 FAM98BQ52LJ0 330 aaKnown RBP19.79■□□□□ 0.76
GPC1-202ENST00000420138 NKAIN2Q5VXU1 208 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 ANGPTL8Q6UXH0 198 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 KANSL1Q7Z3B3 1105 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 MCATQ8IVS2 390 aaKnown RBP19.79■□□□□ 0.76
GPC1-202ENST00000420138 PACRGLQ8N7B6 248 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 ZBTB44Q8NCP5 570 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 CENPNQ96H22 339 aaPredicted RBP19.79■□□□□ 0.76
GPC1-202ENST00000420138 OSBPL11Q9BXB4 747 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 TMEM38AQ9H6F2 299 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 UBAP1Q9NZ09 502 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 EPHA6Q9UF33 1036 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 FAF1Q9UNN5 650 aaPredicted RBP19.79■□□□□ 0.76
GPC1-202ENST00000420138 TTC28Q96AY4 2481 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 RHPN2P1A8MT19 583 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 NUDT21O43809 227 aaKnown RBP19.79■□□□□ 0.76
GPC1-202ENST00000420138 ERAL1O75616 437 aaKnown RBP19.79■□□□□ 0.76
GPC1-202ENST00000420138 NR2F6P10588 404 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 TNFRSF17Q02223 184 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 CHRNB3Q05901 458 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 INTS11Q5TA45 600 aaKnown RBP19.79■□□□□ 0.76
GPC1-202ENST00000420138 EID3Q8N140 333 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 ZNF655Q8N720 491 aaPredicted RBP19.79■□□□□ 0.76
GPC1-202ENST00000420138 OR10Q1Q8NGQ4 319 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 SLC47A1Q96FL8 570 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 TCTN2Q96GX1 697 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 CNBD2Q96M20 576 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 CSF3RQ99062 836 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 NTN4Q9HB63 628 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 SLC22A7Q9Y694 548 aa19.79■□□□□ 0.76
GPC1-202ENST00000420138 TMEM229AB2RXF0 380 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 UPK1AO00322 258 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 B3GALT2O43825 422 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 GALR3O60755 368 aaPredicted RBP19.78■□□□□ 0.76
GPC1-202ENST00000420138 PRSS23O95084 383 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 ARRB1P49407 418 aaPredicted RBP19.78■□□□□ 0.76
GPC1-202ENST00000420138 NCBP2P52298 156 aaKnown RBP eCLIP19.78■□□□□ 0.76
GPC1-202ENST00000420138 OLR1P78380 273 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 PRTGQ2VWP7 1150 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 LRRC23Q53EV4 343 aaPredicted RBP19.78■□□□□ 0.76
GPC1-202ENST00000420138 GCNT6Q5T4J0 391 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 C11orf65Q8NCR3 313 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 PYURFQ96I23 114 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 TGM7Q96PF1 710 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 MAGIXQ9H6Y5 334 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 FSCN3Q9NQT6 498 aa19.78■□□□□ 0.76
GPC1-202ENST00000420138 IGHV5-51A0A0C4DH38 117 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 ZNF860A6NHJ4 632 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 ACOX3O15254 700 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 C8orf89P0DMQ9 161 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 MYF5P13349 255 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 ALDH4A1P30038 563 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 PTGER1P34995 402 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 OR1D5P58170 312 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 CFHR1Q03591 330 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 RBBP4Q09028 425 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 ZC3H12BQ5HYM0 836 aaKnown RBP19.77■□□□□ 0.76
GPC1-202ENST00000420138 PEAR1Q5VY43 1037 aaPredicted RBP19.77■□□□□ 0.76
GPC1-202ENST00000420138 C6orf120Q7Z4R8 191 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 CCDC116Q8IYX3 515 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 ZNF285Q96NJ3 590 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 CCDC3Q9BQI4 270 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 C9orf16Q9BUW7 83 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 SERHL2Q9H4I8 314 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 PHF11Q9UIL8 331 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 NAALAD2Q9Y3Q0 740 aa19.77■□□□□ 0.76
GPC1-202ENST00000420138 WDFY4Q6ZS81 3184 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms