RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 NAT8LQ8N9F0 302 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 OR2L5Q8NG80 312 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 NUBPLQ8TB37 319 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZNF721Q8TF20 911 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 SPACA9Q96E40 222 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 PDLIM5Q96HC4 596 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 SERINC2Q96SA4 455 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 ALOXE3Q9BYJ1 711 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 JKAMPQ9P055 326 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 GUCA1BQ9UMX6 200 aa9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 ANK3Q12955 4377 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-202ENST00000420009 NCKAP5O14513 1909 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 MYOCOSA0A1B0GUC4 107 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 IGKV3-11P04433 115 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 C1GALT1C1LP0DN25 315 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 PGAM1P18669 254 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 GNAZP19086 355 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 SLC6A12P48065 614 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 MTTPP55157 894 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 CDKL1Q00532 357 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 ASPHQ12797 758 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 STX4Q12846 297 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 RCN2Q14257 317 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 SLBPQ14493 270 aaKnown RBP eCLIP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 SLC22A10Q63ZE4 541 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 NSUN5P2Q63ZY6 315 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 ADNP2Q6IQ32 1131 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 TRIM40Q6P9F5 258 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 ABHD17CQ6PCB6 329 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 CXXC5Q7LFL8 322 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 C9orf40Q8IXQ3 194 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 CIARTQ8N365 385 aaPredicted RBP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 LIX1Q8N485 282 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 SPATA3Q8NHX4 192 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 LINC01560Q8TB33 94 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 SLC22A8Q8TCC7 542 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 KIAA1191Q96A73 305 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 HSPBAP1Q96EW2 488 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 REPIN1Q9BWE0 567 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 REXO4Q9GZR2 422 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 PRDM14Q9GZV8 571 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 NT5DC2Q9H857 520 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZNF395Q9H8N7 513 aaPredicted RBP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 LYRM4Q9HD34 91 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 SLC17A6Q9P2U8 582 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 COPS7AQ9UBW8 275 aa9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 CNOT11Q9UKZ1 510 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 CORO1CQ9ULV4 474 aaPredicted RBP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 CHCHD2Q9Y6H1 151 aaPredicted RBP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 FBN1P35555 2871 aaKnown RBP9.37□□□□□ -0.91
TNFAIP3-202ENST00000420009 C15orf38-AP3S2A0A0A6YYH1 394 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 MBD3L4A6NDZ8 208 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 MBD3L3A6NE82 208 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 MBD3L5A6NJ08 208 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 CD8B2A6NJW9 211 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 EEF1E1-BLOC1S5C9J1V9 151 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 CDC7O00311 574 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 EEF1E1O43324 174 aaKnown RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 LDB3O75112 727 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 IL2RAP01589 272 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 FBXO45P0C2W1 286 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 ZNF37AP17032 561 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 PCSK6P29122 969 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 HPDP32754 393 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 TRPC1P48995 793 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 HNMTP50135 292 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 IGLV3-21P80748 117 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 DUSP8Q13202 625 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 Q5PR19 223 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 FAM45BPQ6NSW5 357 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 BLOC1S3Q6QNY0 202 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 PM20D2Q8IYS1 436 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 DND1Q8IYX4 353 aaKnown RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 SLC15A4Q8N697 577 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 OR10G3Q8NGC4 313 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 MBD3L2Q8NHZ7 208 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 GABPB2Q8TAK5 448 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 FAM45AQ8TCE6 357 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 SMPDL3BQ92485 455 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 CCT6BQ92526 530 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 ANKRD7Q92527 254 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 ANKRD9Q96BM1 317 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 RUNDC3BQ96NL0 473 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 DACH2Q96NX9 599 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 TIMP4Q99727 224 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 WDR83Q9BRX9 315 aaKnown RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 YIPF4Q9BSR8 244 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 PRR14Q9BWN1 585 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 PITHD1Q9GZP4 211 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 COPS7BQ9H9Q2 264 aaPredicted RBP9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 PLAC1Q9HBJ0 212 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 PRDM7Q9NQW5 492 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 CNIH4Q9P003 139 aa9.36□□□□□ -0.91
TNFAIP3-202ENST00000420009 NPEPPSL1A6NEC2 478 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 H7C1Q1 480 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 ARHGEF9O43307 516 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 PRAMEF4O60810 478 aa9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 H2AFYO75367 372 aaKnown RBP9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 TRIM3O75382 744 aaPredicted RBP9.35□□□□□ -0.91
TNFAIP3-202ENST00000420009 WDR47O94967 919 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms