RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CDKN2AIPNLQ96HQ2 116 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 CDHR1Q96JP9 859 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 ANKRD27Q96NW4 1050 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 SSX3Q99909 188 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 CACNG6Q9BXT2 260 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 LRRC2Q9BYS8 371 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 SLITRK2Q9H156 845 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 NT5DC2Q9H857 520 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 GRPEL1Q9HAV7 217 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 TMEM161AQ9NX61 479 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 PLEK2Q9NYT0 353 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 CNIH4Q9P003 139 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 MRPL11Q9Y3B7 192 aaKnown RBP3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 ACEP12821 1306 aa3.32□□□□□ -1.88
HMGB1P49-201ENST00000418882 UMODL1Q5DID0 1318 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 IGKV6D-41A0A0C4DH26 115 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 A0A1W2PRQ8 180 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 TMCO5BA8MYB1 307 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 H0Y626 953 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 E2F3O00716 465 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 STBD1O95210 358 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 CHRNA3P32297 505 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 RGS19P49795 217 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 YWHAHQ04917 246 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 SLC22A6Q4U2R8 563 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 VWA2Q5GFL6 755 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 ATAD3CQ5T2N8 411 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 LRRC38Q5VT99 294 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 SNRNP48Q6IEG0 339 aaKnown RBP3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 ARMCX5Q6P1M9 558 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 PIWIL3Q7Z3Z3 882 aaKnown RBP3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 ITIH5Q86UX2 942 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 HSCBQ8IWL3 235 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 LAX1Q8IWV1 398 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 CHDHQ8NE62 594 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 OR4F5Q8NH21 305 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 MRAPQ8TCY5 172 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 PRCCQ92733 491 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 APOL2Q9BQE5 337 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 NTMT1Q9BV86 223 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 TRIM7Q9C029 511 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 WWP1Q9H0M0 922 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 ZDHHC6Q9H6R6 413 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 TNFRSF19Q9NS68 423 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 TECRQ9NZ01 308 aaKnown RBP3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 RCOR3Q9P2K3 495 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 NOL7Q9UMY1 257 aaKnown RBP3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 NAALAD2Q9Y3Q0 740 aa3.31□□□□□ -1.88
HMGB1P49-201ENST00000418882 POGZQ7Z3K3 1410 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 RPGRIP1LQ68CZ1 1315 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 PRRC2AP48634 2157 aaKnown RBP3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 TRAV9-2A0A087WT02 112 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 BCLAF3A2AJT9 711 aaKnown RBP3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 TRIM49BA6NDI0 452 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 DUSP11O75319 330 aaKnown RBP3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 RAD51DO75771 328 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 DUX4L4P0CJ87 422 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 ANPEPP15144 967 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 PTMSP20962 102 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 TNFSF10P50591 281 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 SLC34A1Q06495 639 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 RUNX3Q13761 415 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 MEF2DQ14814 521 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 LTB4RQ15722 352 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 ALKBH5Q6P6C2 394 aaKnown RBP3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 CCBE1Q6UXH8 406 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 GPD1LQ8N335 351 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 C11orf42Q8N5U0 333 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 RELL2Q8NC24 303 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 OR1K1Q8NGR3 316 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 AGPAT1Q99943 283 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 PNPLA3Q9NST1 481 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 VSIG4Q9Y279 399 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 SLC6A5Q9Y345 797 aa3.3□□□□□ -1.88
HMGB1P49-201ENST00000418882 A0A0U1RQK1 487 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 ZNF320A2RRD8 509 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 SLC33A1O00400 549 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 ANXA9O76027 345 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 KBTBD11O94819 623 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 CPNE6O95741 557 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 EPOP01588 193 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 CHRNGP07510 517 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 KLK2P20151 261 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 HMGCLP35914 325 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 IST1P53990 364 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 ASIC1P78348 528 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 MSLNQ13421 630 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 OR1C1Q15619 314 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 KBTBD12Q3ZCT8 623 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 LINC00242Q5T6M2 205 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 PRAMEF8Q5VWM4 474 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 BAIAP2L2Q6UXY1 529 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 LINC00696Q6ZRV3 163 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 ADCK1Q86TW2 530 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 SERINC5Q86VE9 423 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 ZNF444Q8N0Y2 327 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 THEM5Q8N1Q8 247 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 GTSF1Q8WW33 167 aa3.29□□□□□ -1.88
HMGB1P49-201ENST00000418882 ESAMQ96AP7 390 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms