RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 MMP25Q9NPA2 562 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 PSME2Q9UL46 239 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 TP53TG5Q9Y2B4 290 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 RAP2CQ9Y3L5 183 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 CLDN16Q9Y5I7 305 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 CLCA3PQ9Y6N3 262 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 PCSK5Q92824 1860 aa21.62■■□□□ 1.05
SMARCB1-205ENST00000417137 C1orf226A1L170 272 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 NPIPB8E9PQR5 432 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 ITM2AO43736 263 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 FGF17O60258 216 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 ANXA4P09525 319 aaPredicted RBP21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 COX7A2P14406 83 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 PRPH2P23942 346 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 ARRB2P32121 409 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 SLC26A5P58743 744 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 FOLH1Q04609 750 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 OR4N5Q8IXE1 308 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 PELOQ9BRX2 385 aaKnown RBP21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 TUBB1Q9H4B7 451 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 LRTM1Q9HBL6 345 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 C1orf109Q9NX04 203 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 TEX10Q9NXF1 929 aaPredicted RBP21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 WBP11Q9Y2W2 641 aaKnown RBP21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 CCL27Q9Y4X3 112 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 PCDHA9Q9Y5H5 950 aa21.61■■□□□ 1.05
SMARCB1-205ENST00000417137 NUP210LQ5VU65 1888 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 GLOD5A6NK44 160 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 TMEM233B4DJY2 109 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 TGFBR3LH3BV60 316 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 DYRK3O43781 588 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 LYPLA1O75608 230 aaPredicted RBP21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 SASH3O75995 380 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 PIK3R1P27986 724 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 RAE1P78406 368 aaKnown RBP21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 IGLV3-21P80748 117 aaPredicted RBP21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 C19orf57Q0VDD7 668 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 HEPACAMQ14CZ8 416 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 NR6A1Q15406 480 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 CRB2Q5IJ48 1285 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 OR4K14Q8NGD5 310 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 DNAJB14Q8TBM8 379 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 C11orf24Q96F05 449 aaPredicted RBP21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 DGAT2Q96PD7 388 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 KCNK13Q9HB14 408 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 THAP1Q9NVV9 213 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 TEKT2Q9UIF3 430 aa21.6■■□□□ 1.05
SMARCB1-205ENST00000417137 PIP5K1BO14986 540 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 PGRMC2O15173 223 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 DPM1O60762 260 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 PRKRAO75569 313 aaKnown RBP21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 ITGAMP11215 1152 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 DRD2P14416 443 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 STT3AP46977 705 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 RPL14P50914 215 aaKnown RBP21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 TAS2R50P59544 299 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 PLIN5Q00G26 463 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 ID2Q02363 134 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 BST1Q10588 318 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 CES4AQ5XG92 561 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 ISLR2Q6UXK2 745 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 ATG14Q6ZNE5 492 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 Q6ZSR9 355 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 NFAM1Q8NET5 270 aaPredicted RBP21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 B3GNT7Q8NFL0 401 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 OR14A16Q8NHC5 309 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 BRIX1Q8TDN6 353 aaKnown RBP21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 LMF1Q96S06 567 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 SEMA4CQ9C0C4 833 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 MANSC1Q9H8J5 431 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 DLGAP4Q9Y2H0 992 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 TMED5Q9Y3A6 229 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 PTGDR2Q9Y5Y4 395 aa21.59■■□□□ 1.05
SMARCB1-205ENST00000417137 CELA2AP08217 269 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 ALOX15P16050 662 aaPredicted RBP21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 ZNF763Q0D2J5 394 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 NOXRED1Q6NXP6 359 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 ST13P4Q8IZP2 240 aaPredicted RBP21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 ZNF781Q8N8C0 355 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 MORN4Q8NDC4 146 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 C16orf78Q8WTQ4 265 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 PPP3R2Q96LZ3 170 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 EBPLQ9BY08 206 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 EPS8L2Q9H6S3 715 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 ZNF395Q9H8N7 513 aaPredicted RBP21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 PTGFRNQ9P2B2 879 aa21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 PPIEQ9UNP9 301 aaKnown RBP21.58■■□□□ 1.05
SMARCB1-205ENST00000417137 MYOCOSA0A1B0GUC4 107 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 A8MUI8 341 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 C17orf105B2RV13 164 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 K7EM74 188 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 OR10H2O60403 315 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 SLC35E2P0CK97 266 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 ALDH9A1P49189 494 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 CLCN2P51788 898 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 KIAA0040Q15053 153 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 SLC48A1Q6P1K1 146 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 IGFL3Q6UXB1 125 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 ZADH2Q8N4Q0 377 aa21.57■■□□□ 1.04
SMARCB1-205ENST00000417137 SLC5A8Q8N695 610 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms