RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 RNF175Q8N4F7 328 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 MMGT1Q8N4V1 131 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 L3MBTL4Q8NA19 623 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 MTFMTQ96DP5 389 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 ART5Q96L15 291 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 SGCZQ96LD1 299 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 DMRTA2Q96SC8 542 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 IPPKQ9H8X2 491 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 PLSCR2Q9NRY7 297 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 DEPPQ9NTK1 212 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 CPSF2Q9P2I0 782 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 CELSR2Q9HCU4 2923 aa16.31■□□□□ 0.2
PDLIM2-208ENST00000416159 CRYBG3Q68DQ2 2970 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 CACNA1CQ13936 2221 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 LRRC14BA6NHZ5 514 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 PLPP1O14494 284 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 CDC40O60508 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 INHBAP08476 426 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 RBP1P09455 135 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 COX6B1P14854 86 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 CNR1P21554 472 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 BUD31P41223 144 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 TNFRSF17Q02223 184 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 PLGLB1Q02325 96 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 CUL3Q13618 768 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 CPSF6Q16630 551 aaKnown RBP eCLIP16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 MPEG1Q2M385 716 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 ZNF750Q32MQ0 723 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 TECRLQ5HYJ1 363 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 ARHGAP11AQ6P4F7 1023 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 GOLM1Q8NBJ4 401 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 OR2M7Q8NG81 312 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 OR52N2Q8NGI0 321 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 NUBPLQ8TB37 319 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 SLC44A1Q8WWI5 657 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 SENP5Q96HI0 755 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 LYARQ9NX58 379 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 TMCO1Q9UM00 188 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 ATG4BQ9Y4P1 393 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 DNAJC13O75165 2243 aa16.3■□□□□ 0.2
PDLIM2-208ENST00000416159 EML6Q6ZMW3 1958 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 ZNF407Q9C0G0 2248 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 ACOT7O00154 380 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 FOXE1O00358 373 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 ADAM10O14672 748 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 PROM1O43490 865 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 CLDN9O95484 217 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 TPOP07202 933 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 ALOX15P16050 662 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 TNFRSF8P28908 595 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 SERPINB9P50453 376 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 HNRNPH2P55795 449 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 PPIAP62937 165 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 PLIN5Q00G26 463 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 FOLH1Q04609 750 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 PIGGQ5H8A4 983 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 NDUFAF5Q5TEU4 345 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 C18orf63Q68DL7 685 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 TMEM211Q6ICI0 200 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 GK5Q6ZS86 529 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 TAOK1Q7L7X3 1001 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 CD163Q86VB7 1156 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 SLC22A16Q86VW1 577 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 PLD6Q8N2A8 252 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 WDR20Q8TBZ3 569 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 SREK1Q8WXA9 508 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 ATP6V1E2Q96A05 226 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 ISL2Q96A47 359 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 SCYL1Q96KG9 808 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 C16orf45Q96MC5 204 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 PELOQ9BRX2 385 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 DEFB127Q9H1M4 99 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 CDC42EP4Q9H3Q1 356 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 DDX31Q9H8H2 851 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 RYDENQ9NUL5 291 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 DMGDHQ9UI17 866 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 PPT2Q9UMR5 302 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 RNF11Q9Y3C5 154 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 IKBKGQ9Y6K9 419 aa16.29■□□□□ 0.2
PDLIM2-208ENST00000416159 PINLYPA6NC86 204 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 PDE9AO76083 593 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 SIX3O95343 332 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 ACSL3O95573 720 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 IGKV3-11P04433 115 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 BSGP35613 385 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 MAGEA12P43365 314 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 MRM1Q6IN84 353 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 CYP20A1Q6UW02 462 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 C3P1Q6ZMU1 363 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 NCCRP1Q6ZVX7 275 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 GDF7Q7Z4P5 450 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 ST13P4Q8IZP2 240 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 SLC15A4Q8N697 577 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 PTGR2Q8N8N7 351 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 MNS1Q8NEH6 495 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 PPWD1Q96BP3 646 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 SERPINI1Q99574 410 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 FAM173AQ9BQD7 235 aa16.28■□□□□ 0.2
PDLIM2-208ENST00000416159 ZNF717Q9BY31 904 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms