RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 WDR36Q8NI36 951 aaKnown RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 MRPS31Q92665 395 aaKnown RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 IRF7Q92985 503 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 TMEM159Q96B96 161 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 PPCDCQ96CD2 204 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 TPK1Q9H3S4 243 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 CNOT2Q9NZN8 540 aaKnown RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 ACAD8Q9UKU7 415 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 A4GNTQ9UNA3 340 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 ICKQ9UPZ9 632 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 TRAPPC4Q9Y296 219 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 N6AMT1Q9Y5N5 214 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 MYO7AQ13402 2215 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 A0A1W2PS29 197 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 C4orf51C9J302 202 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 CCRL2O00421 344 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 PRKYO43930 277 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 SNX4O95219 450 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 OR12D1P0DN82 309 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 PIPP12273 146 aaPredicted RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 PCSK2P16519 638 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 BSGP35613 385 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 PCBP4P57723 403 aaKnown RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 FUT5Q11128 374 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 NFE2L1Q14494 772 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 SYTL3Q4VX76 610 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 SPOUT1Q5T280 376 aaKnown RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 OXR1Q8N573 874 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 AMER2Q8N7J2 671 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 FBXO15Q8NCQ5 510 aaPredicted RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 SLC7A13Q8TCU3 470 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 TM9SF4Q92544 642 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 TM4SF18Q96CE8 201 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 CRELD1Q96HD1 420 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 TMEM19Q96HH6 336 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 RNF170Q96K19 258 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 NDEL1Q9GZM8 345 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 SLC25A13Q9UJS0 675 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 NOX1Q9Y5S8 564 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 SAGE2PA6NJ88 616 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 BCHEP06276 602 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 COPZ1P61923 177 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 SNRPGP62308 76 aaKnown RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 RACK1P63244 317 aaKnown RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 TEAD2Q15562 447 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 GLYR1Q49A26 553 aaPredicted RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 TCEAL5Q5H9L2 206 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 ATAD3CQ5T2N8 411 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 AGAP6Q5VW22 663 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 SLX4IPQ5VYV7 408 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 PTCHD4Q6ZW05 846 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 SLC9B2Q86UD5 537 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 KIF18BQ86Y91 864 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 AGAP4Q96P64 663 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 SMURF1Q9HCE7 757 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 ASAH2Q9NR71 780 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 CUEDC1Q9NWM3 386 aaPredicted RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 PLEKHB1Q9UF11 243 aaPredicted RBP9.37□□□□□ -0.91
SS18-203ENST00000415083 SLC23A2Q9UGH3 650 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 KCNE2Q9Y6J6 123 aa9.37□□□□□ -0.91
SS18-203ENST00000415083 A0A075B6Q4 140 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 TMPRSS11DO60235 418 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 CATP04040 527 aaKnown RBP9.36□□□□□ -0.91
SS18-203ENST00000415083 C8AP07357 584 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 CISD3P0C7P0 127 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 POU1F1P28069 291 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 PSMB5P28074 263 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 ETV5P41161 510 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 FRKP42685 505 aaPredicted RBP9.36□□□□□ -0.91
SS18-203ENST00000415083 ETV1P50549 477 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 DSTNP60981 165 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 SNRPNP63162 240 aaKnown RBP9.36□□□□□ -0.91
SS18-203ENST00000415083 NTHL1P78549 312 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 ZNF91Q05481 1191 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 DUSP2Q05923 314 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 DBPQ10586 325 aaPredicted RBP9.36□□□□□ -0.91
SS18-203ENST00000415083 HYAL2Q12891 473 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 ZNF630Q2M218 657 aaPredicted RBP9.36□□□□□ -0.91
SS18-203ENST00000415083 ACSM5Q6NUN0 579 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 NANOGP1Q8N7R0 232 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 FAM181AQ8N9Y4 354 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 VPS37AQ8NEZ2 397 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 KBTBD8Q8NFY9 601 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 OR5AR1Q8NGP9 310 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 SLC5A11Q8WWX8 675 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 AP2M1Q96CW1 435 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 NEURL3Q96EH8 262 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 OTUB1Q96FW1 271 aaPredicted RBP9.36□□□□□ -0.91
SS18-203ENST00000415083 PRR14Q9BWN1 585 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 ASPNQ9BXN1 380 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 PLA2G12AQ9BZM1 189 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 SRRQ9GZT4 340 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 MCOLN1Q9GZU1 580 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 OR2AG1Q9H205 316 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 SPHK2Q9NRA0 654 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 TM7SF3Q9NS93 570 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 SPG21Q9NZD8 308 aa9.36□□□□□ -0.91
SS18-203ENST00000415083 TESQ9UGI8 421 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms