RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 SEMA3AQ14563 771 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 CCDC14Q49A88 953 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 AARS2Q5JTZ9 985 aaKnown RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 TMEM198Q66K66 360 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 ATG9BQ674R7 924 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 PLEKHA7Q6IQ23 1121 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 TMEM81Q6P7N7 255 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 GBP6Q6ZN66 633 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 STRADAQ7RTN6 431 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 GSTA5Q7RTV2 222 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 KMT5CQ86Y97 462 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 UMODL1-AS1Q8N2C9 162 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 BBS5Q8N3I7 341 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 CATSPER1Q8NEC5 780 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 ANKRD20A12PQ8NF67 263 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 NR4A3Q92570 626 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 SGCDQ92629 289 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 AKAP1Q92667 903 aaKnown RBP eCLIP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 KCNJ9Q92806 393 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 RFKQ969G6 155 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 ZNF653Q96CK0 615 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 ZNF501Q96CX3 271 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 SCRN2Q96FV2 425 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 COX14Q96I36 57 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 THOC3Q96J01 351 aaKnown RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 MAGED4Q96JG8 741 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 Q96MF0 132 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 LRFN5Q96NI6 719 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 AGAP3Q96P47 875 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 SMIM14Q96QK8 99 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 SMR3AQ99954 134 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 C17orf62Q9BQA9 187 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 ZNF559Q9BR84 538 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 THAP7Q9BT49 309 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 SPATA16Q9BXB7 569 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 FSD1LQ9BXM9 530 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 ADGRE3Q9BY15 652 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 TRIM2Q9C040 744 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 SLC39A8Q9C0K1 460 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 CTDSP1Q9GZU7 261 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 CLSTN2Q9H4D0 955 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 LRRC19Q9H756 370 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 SLC40A1Q9NP59 571 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 SLC35C2Q9NQQ7 365 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 FAM207AQ9NSI2 230 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 POT1Q9NUX5 634 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 GPATCH2LQ9NWQ4 482 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 HRASLS2Q9NWW9 162 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 IL1RAPL1Q9NZN1 696 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 MARCH4Q9P2E8 410 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 ATXN10Q9UBB4 475 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 EPHA6Q9UF33 1036 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 SLC23A2Q9UGH3 650 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 TINAGQ9UJW2 476 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 RPS6KA6Q9UK32 745 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 FBXL4Q9UKA2 621 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 PSMD13Q9UNM6 376 aa4.31□□□□□ -1.72
PTPRK-210ENST00000415055 CHD3Q12873 2000 aaKnown RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 PHF3Q92576 2039 aaKnown RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 FBN1P35555 2871 aaKnown RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 HRNRQ86YZ3 2850 aaPredicted RBP4.31□□□□□ -1.72
PTPRK-210ENST00000415055 CPAMD8Q8IZJ3 1885 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 TEX13CA0A0J9YWL9 993 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 C1orf232A0A0U1RR37 186 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 GSAPA4D1B5 854 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 OR6C74A6NCV1 312 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 VWC2LB2RUY7 222 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 MCIDASD6RGH6 385 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 E7EQ34 232 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 AP4M1O00189 453 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 EEF2KO00418 725 aaKnown RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 ZNF749O43361 778 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 SLC19A2O60779 497 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 ZWINTO95229 277 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 PGLSO95336 258 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 CLDN7O95471 211 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 GNA14O95837 355 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 F10P00742 488 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 MBPP02686 304 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 APOA4P06727 396 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 ENO1P06733 434 aaKnown RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 HOXB5P09067 269 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 HBQ1P09105 142 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 EGR2P11161 476 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 ZNF30P17039 623 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 DESP17661 470 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 VCLP18206 1134 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 POLR2CP19387 275 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 GPD1P21695 349 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 IL4RP24394 825 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 PCSK6P29122 969 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 PBLDP30039 288 aaPredicted RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 FMO4P31512 558 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 RORAP35398 523 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 LMAN1P49257 510 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 TDGF1P3P51864 188 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 STC1P52823 247 aa4.3□□□□□ -1.72
PTPRK-210ENST00000415055 RAE1P78406 368 aaKnown RBP4.3□□□□□ -1.72
PTPRK-210ENST00000415055 FOLH1Q04609 750 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms