RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	LIX1	Q8N485	282 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	DNAJB14	Q8TBM8	379 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	ACTRT2	Q8TDY3	377 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	MAEL	Q96JY0	434 aa	Known RBP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	FER1L6-AS2	Q96M78	137 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	TSSK3	Q96PN8	268 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	WDR55	Q9H6Y2	383 aa	Predicted RBP	12.35	□□□□□ -0.43
SF1-206	ENST00000413725	MIEF1	Q9NQG6	463 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	NECTIN3	Q9NQS3	549 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	FGFR1OP2	Q9NVK5	253 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	P4HTM	Q9NXG6	502 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	ASIC5	Q9NY37	505 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	EHD3	Q9NZN3	535 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	MAN2B2	Q9Y2E5	1009 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	CACNA1B	Q00975	2339 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	USP24	Q9UPU5	2620 aa		12.35	□□□□□ -0.43
SF1-206	ENST00000413725	PCSK5	Q92824	1860 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	SOCS6	O14544	535 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	ZNF195	O14628	629 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	FGF17	O60258	216 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	GPR75	O95800	540 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	FURIN	P09958	794 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	PCSK2	P16519	638 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	DDC	P20711	480 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	TACR1	P25103	407 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	HPCAL1	P37235	193 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	RPL3	P39023	403 aa	Known RBP	12.34	□□□□□ -0.43
SF1-206	ENST00000413725	EFNA3	P52797	238 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	RRAD	P55042	308 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	AQP5	P55064	265 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	OR4D2	P58180	307 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	CXADR	P78310	365 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	ATP1A4	Q13733	1029 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	SLC9B1	Q4ZJI4	515 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	SFT2D3	Q587I9	215 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	FAM71E1	Q6IPT2	247 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	SLC48A1	Q6P1K1	146 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	KIRREL2	Q6UWL6	708 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	SPATA19	Q7Z5L4	167 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	SAMD14	Q8IZD0	417 aa	Predicted RBP	12.34	□□□□□ -0.43
SF1-206	ENST00000413725	OR11G2	Q8NGC1	345 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	OR4K14	Q8NGD5	310 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	CEP70	Q8NHQ1	597 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	12.34	□□□□□ -0.43
SF1-206	ENST00000413725	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.34	□□□□□ -0.43
SF1-206	ENST00000413725	C8orf44	Q96CB5	159 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	KLHL29	Q96CT2	875 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	LPAR4	Q99677	370 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	PELO	Q9BRX2	385 aa	Known RBP	12.34	□□□□□ -0.43
SF1-206	ENST00000413725	ALOXE3	Q9BYJ1	711 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	NPHS2	Q9NP85	383 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	ADAP2	Q9NPF8	381 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	GIMAP4	Q9NUV9	329 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	HEY2	Q9UBP5	337 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	FBXL4	Q9UKA2	621 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	MAPRE3	Q9UPY8	281 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	ZNF780B	Q9Y6R6	833 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	ZFHX4	Q86UP3	3567 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	CPAMD8	Q8IZJ3	1885 aa		12.34	□□□□□ -0.43
SF1-206	ENST00000413725	IGHV1-45	A0A0A0MS14	117 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	NSG1	A0A0A6YYJ2	146 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725		A0A1W2PQ72	361 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	HAX1	O00165	279 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	PGRMC2	O15173	223 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	OR10H2	O60403	315 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	ERAL1	O75616	437 aa	Known RBP	12.33	□□□□□ -0.44
SF1-206	ENST00000413725	HP	P00738	406 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	IFNA16	P05015	189 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	G6PD	P11413	515 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	COX6A1	P12074	109 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	COX7A2	P14406	83 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	IDH3A	P50213	366 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	IGLV3-21	P80748	117 aa	Predicted RBP	12.33	□□□□□ -0.44
SF1-206	ENST00000413725	PLIN5	Q00G26	463 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	ID2	Q02363	134 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	DEFB109B	Q30KR1	87 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	NDUFAF7	Q7L592	441 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	R3HCC1L	Q7Z5L2	792 aa	Known RBP	12.33	□□□□□ -0.44
SF1-206	ENST00000413725	OR4N5	Q8IXE1	308 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	MMP21	Q8N119	569 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	TMEM102	Q8N9M5	508 aa	Predicted RBP	12.33	□□□□□ -0.44
SF1-206	ENST00000413725	CLHC1	Q8NHS4	586 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	SNRNP27	Q8WVK2	155 aa	Known RBP	12.33	□□□□□ -0.44
SF1-206	ENST00000413725	STON2	Q8WXE9	905 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	THOC1	Q96FV9	657 aa	Known RBP	12.33	□□□□□ -0.44
SF1-206	ENST00000413725	CHMP6	Q96FZ7	201 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	EGLN2	Q96KS0	407 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	DGAT2	Q96PD7	388 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	ZNF317	Q96PQ6	595 aa	Predicted RBP	12.33	□□□□□ -0.44
SF1-206	ENST00000413725	TUBB6	Q9BUF5	446 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	CCDC28B	Q9BUN5	200 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	ZNF700	Q9H0M5	742 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	REEP4	Q9H6H4	257 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	TCF7L2	Q9NQB0	619 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	PNO1	Q9NRX1	252 aa	Known RBP	12.33	□□□□□ -0.44
SF1-206	ENST00000413725	FAM53C	Q9NYF3	392 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	BAIAP2L1	Q9UHR4	511 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	DCTN4	Q9UJW0	460 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	UTS2R	Q9UKP6	389 aa		12.33	□□□□□ -0.44
SF1-206	ENST00000413725	ENTPD4	Q9Y227	616 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms