RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 KCNC1P48547 511 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 ASCL1P50553 236 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 DOC2AQ14183 400 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 ACSF3Q4G176 576 aaPredicted RBP11.19□□□□□ -0.62
LIMS2-210ENST00000413578 SLC22A10Q63ZE4 541 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 KRTAP1-3Q8IUG1 177 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 SLC15A4Q8N697 577 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 ACOT4Q8N9L9 421 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 WFDC11Q8NEX6 87 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 NEIL3Q8TAT5 605 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 RNASE6Q93091 150 aaKnown RBP11.19□□□□□ -0.62
LIMS2-210ENST00000413578 CAPZA3Q96KX2 299 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 KCNC2Q96PR1 638 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 NAP1L3Q99457 506 aaPredicted RBP11.19□□□□□ -0.62
LIMS2-210ENST00000413578 TBCDQ9BTW9 1192 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 CAPS2Q9BXY5 557 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 MS4A8Q9BY19 250 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 ROGDIQ9GZN7 287 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 SLC6A15Q9H2J7 730 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 COPS7BQ9H9Q2 264 aaPredicted RBP11.19□□□□□ -0.62
LIMS2-210ENST00000413578 DNAJC11Q9NVH1 559 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 ALKBH4Q9NXW9 302 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 CTNNAL1Q9UBT7 734 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 CNOT11Q9UKZ1 510 aaKnown RBP11.19□□□□□ -0.62
LIMS2-210ENST00000413578 CHMP2BQ9UQN3 213 aa11.19□□□□□ -0.62
LIMS2-210ENST00000413578 FN1P02751 2386 aaKnown RBP11.19□□□□□ -0.62
LIMS2-210ENST00000413578 GOLGA6L6A8MZA4 724 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 HRKO00198 91 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 RTCAO00442 366 aaKnown RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 TP73O15350 636 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 EPPINO95925 133 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 FBXO45P0C2W1 286 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 DRD2P14416 443 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 TNNI3P19429 210 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 BMP5P22003 454 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 HIST1H1TP22492 207 aaPredicted RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 ATP5A1P25705 553 aaKnown RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 HOXC12P31275 282 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 UQCRC1P31930 480 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 TIMP3P35625 211 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 STT3AP46977 705 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 ID2Q02363 134 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 TBL3Q12788 808 aaKnown RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 DEFB113Q30KQ7 82 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 FBXO48Q5FWF7 155 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 CDKL4Q5MAI5 379 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 HP1BP3Q5SSJ5 553 aaPredicted RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 PRAMEF20Q5VT98 475 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 DGAT2L6Q6ZPD8 337 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 FRA10AC1Q70Z53 315 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 BIVMQ86UB2 503 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 DND1Q8IYX4 353 aaKnown RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 C7orf57Q8NEG2 295 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 TNIP2Q8NFZ5 429 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 GOT1L1Q8NHS2 421 aaPredicted RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 ZNF473Q8WTR7 871 aaKnown RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 LRRC39Q96DD0 335 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 PTCD3Q96EY7 689 aaKnown RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 CFAP36Q96G28 342 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 EFCAB11Q9BUY7 163 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 DERL2Q9GZP9 239 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 PRDM14Q9GZV8 571 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 PLEKHF2Q9H8W4 249 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 POPDC3Q9HBV1 291 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 RYDENQ9NUL5 291 aaKnown RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 MOCS1Q9NZB8 636 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 COPS7AQ9UBW8 275 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 ZNF629Q9UEG4 869 aaPredicted RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 ASIC3Q9UHC3 531 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 FOXD3Q9UJU5 478 aaPredicted RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 BOKQ9UMX3 212 aaPredicted RBP11.18□□□□□ -0.62
LIMS2-210ENST00000413578 EDARQ9UNE0 448 aa11.18□□□□□ -0.62
LIMS2-210ENST00000413578 NCF1BA6NI72 391 aaPredicted RBP11.17□□□□□ -0.62
LIMS2-210ENST00000413578 NCF1CA8MVU1 366 aaPredicted RBP11.17□□□□□ -0.62
LIMS2-210ENST00000413578 AHRRA9YTQ3 701 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 DVL2O14641 736 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 TRIM3O75382 744 aaPredicted RBP11.17□□□□□ -0.62
LIMS2-210ENST00000413578 STK16O75716 305 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 RAF1P04049 648 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 NCF1P14598 390 aaPredicted RBP11.17□□□□□ -0.62
LIMS2-210ENST00000413578 TACR1P25103 407 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 CASP2P42575 452 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 ZNF136P52737 540 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 DGKQP52824 942 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 WNT3P56703 355 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 LTBQ06643 244 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 TGM3Q08188 693 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 CRYZQ08257 329 aaKnown RBP11.17□□□□□ -0.62
LIMS2-210ENST00000413578 MGAT5Q09328 741 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 MORF4L2Q15014 288 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 PPP1R7Q15435 360 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 TBCCQ15814 346 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 MAATS1Q7Z4T9 603 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 PDIK1LQ8N165 341 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 TCAIMQ8N3R3 496 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 ZNF441Q8N8Z8 693 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 BBOF1Q8ND07 529 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 SRFBP1Q8NEF9 429 aaKnown RBP11.17□□□□□ -0.62
LIMS2-210ENST00000413578 OR10G3Q8NGC4 313 aa11.17□□□□□ -0.62
LIMS2-210ENST00000413578 SLC22A8Q8TCC7 542 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms