RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SHMT2P34897 504 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 GJA5P36382 358 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 GDF5P43026 501 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 KCNC1P48547 511 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 LIMK2P53671 638 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 WDR20Q8TBZ3 569 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 BRI3BPQ8WY22 251 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 SMPDL3AQ92484 453 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 RAD9AQ99638 391 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 TMEM185BQ9H7F4 350 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 SRRDQ9UH36 339 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 RPH3ALQ9UNE2 315 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 TRBC2A0A5B9 178 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 HEPACAM2A8MVW5 462 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 LEFTY1O75610 366 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 RPLP0P6Q8NHW5 317 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 RBPJLQ9UBG7 517 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 SCML2Q9UQR0 700 aa10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 TMEM184BQ9Y519 407 aaPredicted RBP10.8□□□□□ -0.68
PRPF40A-202ENST00000410080 ANKRD66B4E2M5 251 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 CLEC3BP05452 202 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 ASGR2P07307 311 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 CSF2RAP15509 400 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 LSSP48449 732 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 ZNF773Q6PK81 442 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 ZNF584Q8IVC4 421 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 NUP43Q8NFH3 380 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 RRP8O43159 456 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 DIRAS3O95661 229 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 RAP2AP10114 183 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 DSC3Q14574 896 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 SYPL2Q5VXT5 272 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 EGFLAMQ63HQ2 1017 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 MRPL41Q8IXM3 137 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 KCNN1Q92952 543 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 PTERQ96BW5 349 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 ZC3HAV1LQ96H79 300 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 MYRFLQ96LU7 910 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 WRAP73Q9P2S5 460 aaPredicted RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 SCP2D1Q9UJQ7 156 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 AKR1C2P52895 323 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 ZNF805Q5CZA5 627 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 GALNT6Q8NCL4 622 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 GNPDA2Q8TDQ7 276 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 MROQ9BYG7 248 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 SLC2A1P11166 492 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 HHEXQ03014 270 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 MELKQ14680 651 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 HERC3Q15034 1050 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 RBM20Q5T481 1227 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 THAP4Q8WY91 577 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 SPOCK2Q92563 424 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 ROPN1LQ96C74 230 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 TMEM209Q96SK2 561 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 KATNBL1Q9H079 304 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 VNN1O95497 513 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 NUDT6P53370 316 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 JAM2P57087 298 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 FXYD4P59646 89 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 PSMA6P60900 246 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 RRAS2P62070 204 aaPredicted RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 LTC4SQ16873 150 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 PKDCCQ504Y2 493 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 AWAT2Q6E213 333 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 GOLGA7Q7Z5G4 137 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 SNIP1Q8TAD8 396 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 CENPNQ96H22 339 aaPredicted RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 SUSD3Q96L08 255 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 FBRSQ9HAH7 460 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 A0A0D9SEW6 157 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 ANKRD33BA6NCL7 494 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 GPR37L1O60883 481 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 OAS1P00973 400 aaKnown RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 SLC2A5P22732 501 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 SOWAHAQ2M3V2 549 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 C22orf39Q6P5X5 142 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 CLEC20AQ6ZU45 233 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 FUZQ9BT04 418 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 TMEM109Q9BVC6 243 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 UBE2J1Q9Y385 318 aaPredicted RBP10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 SHPRHQ149N8 1683 aa10.79□□□□□ -0.68
PRPF40A-202ENST00000410080 RNF225M0QZC1 329 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 CDRT1O95170 752 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 LYPLA2O95372 231 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 ETV3P41162 512 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 ASPGQ86U10 573 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 ZC3HC1Q86WB0 502 aaKnown RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 CSNK1A1LQ8N752 337 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 DPAGT1Q9H3H5 408 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 DECR2Q9NUI1 292 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 A0A1W2PPW3 197 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 CAPN5O15484 640 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 BMP4P12644 408 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 EPCAMP16422 314 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 CHRNB2P17787 502 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 NAA10P41227 235 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 PXNP49023 591 aaPredicted RBP10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 UBE2Q1Q7Z7E8 422 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 OR5L2Q8NGL0 311 aa10.78□□□□□ -0.68
PRPF40A-202ENST00000410080 NMUR2Q9GZQ4 415 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms