RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 LIMK2P53671 638 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 EEF1A1P68104 462 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 ITGA9Q13797 1035 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 EXOSC2Q13868 293 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 GTF2H2Q13888 395 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 DHX34Q14147 1143 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 MEF2DQ14814 521 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 P2RY14Q15391 338 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 OR1C1Q15619 314 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 HKDC1Q2TB90 917 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 GPR33Q49SQ1 333 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 EFHC1Q5JVL4 640 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 FNBP1LQ5T0N5 605 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 EEF1A1P5Q5VTE0 462 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 LYPLAL1Q5VWZ2 237 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 PYHIN1Q6K0P9 492 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 GTF2H2CQ6P1K8 395 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 TRIM65Q6PJ69 517 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 DHRS11Q6UWP2 260 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 Q6ZPB1 254 aaPredicted RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 ZNF788Q6ZQV5 615 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 C17orf107Q6ZR85 190 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 ASB18Q6ZVZ8 466 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 C16orf62Q7Z3J2 963 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 CDR2LQ86X02 465 aaPredicted RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 ZC3H3Q8IXZ2 948 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 SRRM1Q8IYB3 904 aaKnown RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 CLIP4Q8N3C7 705 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 ZNF321PQ8N8H1 164 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 MLKLQ8NB16 471 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 OR52N5Q8NH56 324 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 SLC22A8Q8TCC7 542 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 GRHL3Q8TE85 626 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 PIK3R3Q92569 461 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 MTBPQ96DY7 904 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 COQ2Q96H96 371 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 URB1-AS1Q96HZ7 61 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 INPP4AQ96PE3 977 aaPredicted RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 KRT12Q99456 494 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 CDCA3Q99618 268 aaPredicted RBP4.44□□□□□ -1.7
LSM5-205ENST00000409952 RTP3Q9BQQ7 232 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 SLC25A33Q9BSK2 321 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 CCM2Q9BSQ5 444 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 NUP58Q9BVL2 599 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 EHD1Q9H4M9 534 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 ZNF665Q9H7R5 613 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 FGF21Q9NSA1 209 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 MIOXQ9UGB7 285 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 RNF115Q9Y4L5 304 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 OR1A2Q9Y585 309 aa4.44□□□□□ -1.7
LSM5-205ENST00000409952 TRAV26-1A0A087WT03 109 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 A0A1W2PN81 502 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 KRT86O43790 486 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 SERPINI2O75830 405 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 NEBLO76041 1014 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 ANP32DO95626 131 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 NDUFB10O96000 172 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 PAHP00439 452 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 CYP11B1P15538 503 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 PSMA2P25787 234 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 HOXD10P28358 340 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 RFC2P35250 354 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 CHRNA7P36544 502 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 USP8P40818 1118 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 CD151P48509 253 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 FNTAP49354 379 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 PPIAP62937 165 aaKnown RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 MRPS21P82921 87 aaKnown RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 TGM3Q08188 693 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 MFGE8Q08431 387 aaPredicted RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 FGL1Q08830 312 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 PJVKQ0ZLH3 352 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 BST1Q10588 318 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 ZNF155Q12901 538 aaPredicted RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 SLC10A2Q12908 348 aaPredicted RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 DRP2Q13474 957 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 KRT81Q14533 505 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 CLPPQ16740 277 aaPredicted RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 PDLIM3Q53GG5 364 aaPredicted RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 HSP90B2PQ58FF3 399 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 PRAMEF5Q5TYX0 476 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 PRAMEF6Q5VXH4 476 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 CARD17Q5XLA6 110 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 TMEM225Q6GV28 225 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 ZSCAN25Q6NSZ9 544 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 WASH2PQ6VEQ5 465 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 TMEM64Q6YI46 380 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 ZNF782Q6ZMW2 699 aaPredicted RBP4.43□□□□□ -1.7
LSM5-205ENST00000409952 PTF1AQ7RTS3 328 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 TRPM8Q7Z2W7 1104 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 ZNF554Q86TJ5 538 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 EGFL6Q8IUX8 553 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 EID3Q8N140 333 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 CNBD1Q8NA66 436 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 CCDC197Q8NCU1 140 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 DDHD1Q8NEL9 900 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 OR5D13Q8NGL4 314 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 OR1J1Q8NGS3 322 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 OR13C5Q8NGS8 318 aa4.43□□□□□ -1.7
LSM5-205ENST00000409952 SPATA22Q8NHS9 363 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms