RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 LIM2P55344 173 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 GFERP55789 205 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 CFHR1Q03591 330 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 SQSTM1Q13501 440 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 RUNX2Q13950 521 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 HLA-BQ31612 363 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 C18orf63Q68DL7 685 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 HMBOX1Q6NT76 420 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 IRGCQ6NXR0 463 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 TMEM64Q6YI46 380 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 ERMP1Q7Z2K6 904 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 KRT77Q7Z794 578 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 PDSS2Q86YH6 399 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 FAM181AQ8N9Y4 354 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 OR6C4Q8NGE1 309 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 SUN3Q8TAQ9 357 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 FAM110BQ8TC76 370 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 NEURL3Q96EH8 262 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 CNRIP1Q96F85 164 aaPredicted RBP5.21□□□□□ -1.57
EPHA4-202ENST00000409854 ZDHHC12Q96GR4 267 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 ZNF681Q96N22 645 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 AMDHD1Q96NU7 426 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 PKP2Q99959 881 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 EFHD1Q9BUP0 239 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 NLNQ9BYT8 704 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 GLIPR2Q9H4G4 154 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 TMEM38AQ9H6F2 299 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 IL21RQ9HBE5 538 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 AGPAT4Q9NRZ5 378 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 DCAF13Q9NV06 445 aaKnown RBP5.21□□□□□ -1.57
EPHA4-202ENST00000409854 MS4A12Q9NXJ0 267 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 C5AR2Q9P296 337 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 UTS2RQ9UKP6 389 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 C15orf41Q9Y2V0 281 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 LRRC42Q9Y546 428 aa5.21□□□□□ -1.57
EPHA4-202ENST00000409854 SCN2AQ99250 2005 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 IGHV5-51A0A0C4DH38 117 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 FITM1A5D6W6 292 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 PGRMC2O15173 223 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 B4GAT1O43505 415 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 DUX1O43812 170 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 B3GALT2O43825 422 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 PRKRAO75569 313 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 KRT75O95678 551 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 RPSAP08865 295 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 SP9P0CG40 484 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 NR2F6P10588 404 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 HOXB6P17509 224 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 CSF2RBP32927 897 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 PCGF2P35227 344 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 CLK1P49759 484 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 EMP3P54852 163 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 VSX2P58304 361 aaPredicted RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 CTAG1AP78358 180 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 EEF1A2Q05639 463 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 CYP51A1Q16850 503 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 THOC7Q6I9Y2 204 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 SLC23A3Q6PIS1 610 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 WDR74Q6RFH5 385 aaPredicted RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 FAM92BQ6ZTR7 304 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 PRSS42Q7Z5A4 293 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 MCATQ8IVS2 390 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 KBTBD2Q8IY47 623 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 ZBTB8BQ8NAP8 495 aaPredicted RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 ZCCHC10Q8TBK6 192 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 SFXN5Q8TD22 340 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 PIGKQ92643 395 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 EXOSC8Q96B26 276 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 DPH2Q9BQC3 489 aaPredicted RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 MAGIXQ9H6Y5 334 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 ANAPC2Q9UJX6 822 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 FBXW2Q9UKT8 454 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 DNAH14Q0VDD8 3507 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 GSTA4O15217 222 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 B4GALT2O60909 372 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 ZBTB11O95625 1053 aaPredicted RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 SEMG1P04279 462 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 CTSBP07858 339 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 IFI6P09912 130 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 FCGR1AP12314 374 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 PEX2P28328 305 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 CD1CP29017 333 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 NTSP30990 170 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 BUD31P41223 144 aaPredicted RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 GCGRP47871 477 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 CDK9P50750 372 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 MANFP55145 182 aaKnown RBP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 OR1D5P58170 312 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 DUSP2Q05923 314 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 RBBP4Q09028 425 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 MYBPC3Q14896 1274 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 DEFB134Q4QY38 66 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 TBCELQ5QJ74 424 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 COX20Q5RI15 118 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.21□□□□□ -1.58
EPHA4-202ENST00000409854 OR52E8Q6IFG1 317 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 NIPAL1Q6NVV3 410 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 SPRED1Q7Z699 444 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 EID3Q8N140 333 aa5.21□□□□□ -1.58
EPHA4-202ENST00000409854 CLEC4FQ8N1N0 589 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms