RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ABHD5Q8WTS1 349 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TANKQ92844 425 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 MCHR1Q99705 422 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TPT1P8Q9HAU6 139 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ATP13A2Q9NQ11 1180 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 LIPT1Q9Y234 373 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SLC30A4O14863 429 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 HOXC11O43248 304 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ITGA10O75578 1167 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ITGA5P08648 1049 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 RAP2AP10114 183 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 DBTP11182 482 aaKnown RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 IL32P24001 234 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 WNT7BP56706 349 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TAS2R38P59533 333 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 CSNK2A1P68400 391 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 HSD11B2P80365 405 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SLC18A2Q05940 514 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SLC10A2Q12908 348 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 MELKQ14680 651 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 PON3Q15166 354 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM52BQ4KMG9 183 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 C14orf28Q4W4Y0 310 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 REEP3Q6NUK4 255 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TSSK4Q6SA08 328 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 OPN5Q6U736 354 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ZZZ3Q8IYH5 903 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 NPWQ8N729 165 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 GPR26Q8NDV2 337 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 OR2L3Q8NG85 312 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 OR13H1Q8NG92 308 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 OR7A2PQ8NGA2 310 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 PMM1Q92871 262 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 UFD1Q92890 307 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 GAL3ST3Q96A11 431 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 BORCS8Q96FH0 119 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 FCRL3Q96P31 734 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 DOHHQ9BU89 302 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 C6orf106Q9H6K1 298 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 OR6C2Q9NZP2 312 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 STOX2Q9P2F5 926 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 LAMP5Q9UJQ1 280 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SPATA2Q9UM82 520 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SLC7A11Q9UPY5 501 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 FADS3Q9Y5Q0 445 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 MAST2Q6P0Q8 1798 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 PPM1BO75688 479 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 KRT36O76013 467 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 RPP14O95059 124 aaKnown RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 C1SP09871 688 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 THRBP10828 461 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 CDK4P11802 303 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ANXA8P13928 327 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SSR4P51571 173 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 CORO7P57737 925 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 OR1D5P58170 312 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 UFM1P61960 85 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 KLF1Q13351 362 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TRAM2Q15035 370 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 LRIT3Q3SXY7 679 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SLC2A7Q6PXP3 512 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ADAMTSL4Q6UY14 1074 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 KBTBD2Q8IY47 623 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ZCCHC7Q8N3Z6 543 aaKnown RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 HUS1BQ8NHY5 278 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 LRRC15Q8TF66 581 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 KCNA7Q96RP8 456 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM109Q9BVC6 243 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 STRA6Q9BX79 667 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SLC12A9Q9BXP2 914 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM168Q9H0V1 697 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 DENND2DQ9H6A0 471 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 DYNLRB1Q9NP97 96 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 RPL36Q9Y3U8 105 aaKnown RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 USP3Q9Y6I4 520 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 MYH13Q9UKX3 1938 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 GGT3PA6NGU5 568 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 UNC119BA6NIH7 251 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 RGS10O43665 173 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SSNA1O43805 119 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF821O75541 412 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SMSP52788 366 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 KIAA1024LP59773 190 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 SCRN3Q0VDG4 424 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ADAM15Q13444 863 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TCEAL1Q15170 157 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 RNASE12Q5GAN4 147 aaKnown RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 C1orf220Q5T0J3 134 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 EEF1A1P5Q5VTE0 462 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 NADSYN1Q6IA69 706 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ADNP2Q6IQ32 1131 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 FRMD7Q6ZUT3 714 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF627Q7L945 461 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM173Q86WV6 379 aaPredicted RBP4.79□□□□□ -1.64
SCN3A-203ENST00000409101 ZFAND4Q86XD8 727 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 OR4K1Q8NGD4 311 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 UBASH3BQ8TF42 649 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 KCNE4Q8WWG9 221 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 FIZ1Q96SL8 496 aa4.79□□□□□ -1.64
SCN3A-203ENST00000409101 COPS4Q9BT78 406 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms