RNA–Protein interactions for RNA: ENST00000409064.5

KDM3A-202, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-202ENST00000409064 HIPK1Q86Z02 1210 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ZDHHC21Q8IVQ6 265 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ZNF100Q8IYN0 542 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 UXS1Q8NBZ7 420 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 C7orf57Q8NEG2 295 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 HSPBAP1Q96EW2 488 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ZNF382Q96SR6 550 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 GPATCH1Q9BRR8 931 aaKnown RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 SLC12A9Q9BXP2 914 aa9.64□□□□□ -0.87
KDM3A-202ENST00000409064 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 DDX28Q9NUL7 540 aaKnown RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 PTBP2Q9UKA9 531 aaKnown RBP9.64□□□□□ -0.87
KDM3A-202ENST00000409064 POM121BA6NF01 834 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 HHLA1C9JL84 531 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 PDYNP01213 254 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 TFAP2AP05549 437 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 EIF2B2P49770 351 aaKnown RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 NR0B1P51843 470 aaKnown RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 HSF2Q03933 536 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 RPE65Q16518 533 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 TMEM196Q5HYL7 178 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 C6orf132Q5T0Z8 1188 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 NKAIN2Q5VXU1 208 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CXorf57Q6NSI4 855 aaKnown RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ATG14Q6ZNE5 492 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 LARP4Q71RC2 724 aaKnown RBP eCLIP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ERMP1Q7Z2K6 904 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 NUP43Q8NFH3 380 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 OR9I1Q8NGQ6 314 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 RADILQ96JH8 1075 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 HDAC8Q9BY41 377 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 HDHD2Q9H0R4 259 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 TTYH1Q9H313 450 aaPredicted RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CD320Q9NPF0 282 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 FAM120CQ9NX05 1096 aaKnown RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 BRINP1O60477 761 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CCNB2O95067 398 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 NR2C1P13056 603 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 MC1RQ01726 317 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 PLP2Q04941 152 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CRB2Q5IJ48 1285 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CLEC12AQ5QGZ9 265 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 DDI2Q5TDH0 399 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 OR4C11Q6IEV9 310 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 FIGNL1Q6PIW4 674 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 RNF130Q86XS8 419 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 OR52B6Q8NGF0 335 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 RHEBL1Q8TAI7 183 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 PNPLA2Q96AD5 504 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 RBP7Q96R05 134 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 INSM2Q96T92 566 aaPredicted RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CGREF1Q99674 301 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 DOHHQ9BU89 302 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 G6PC3Q9BUM1 346 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 POLR2J3Q9H1A7 115 aaKnown RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 RIMS3Q9UJD0 308 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 IQCMA0A1B0GVH7 501 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ANKRD33BA6NCL7 494 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 WWP2O00308 870 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 FARS2O95363 451 aaKnown RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ABOP16442 354 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CAPGP40121 348 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 INHBCP55103 352 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ZNF33BQ06732 778 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 MED22Q15528 200 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ZNF789Q5FWF6 425 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 FRMD1Q8N878 549 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 IL17RCQ8NAC3 791 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ADAMTS18Q8TE60 1221 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 WBP2Q969T9 261 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 IL21Q9HBE4 155 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 MTCH2Q9Y6C9 303 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ZCWPW2A0A1B0GU75 182 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 TRBC2A0A5B9 178 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 TMEM221A6NGB7 291 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 M0R296 226 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 AP1G1O43747 822 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CPNE3O75131 537 aaKnown RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 SLC35E2BP0CK96 405 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ZNF12P17014 697 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 EIF1AXP47813 144 aaKnown RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 DNAJB13P59910 316 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 RBPJQ06330 500 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CBX3Q13185 183 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 SERTAD2Q14140 314 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 SLC2A7Q6PXP3 512 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 TMEM107Q6UX40 140 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ZBTB46Q86UZ6 589 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ZNF433Q8N7K0 673 aaPredicted RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 DNAJB8Q8NHS0 232 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 NFKBIDQ8NI38 313 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 TSEN15Q8WW01 171 aaKnown RBP9.63□□□□□ -0.87
KDM3A-202ENST00000409064 MEAF6Q9HAF1 191 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 UBAP1Q9NZ09 502 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 CKLFQ9UBR5 152 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 KCND3Q9UK17 655 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ZNF318Q5VUA4 2279 aa9.63□□□□□ -0.87
KDM3A-202ENST00000409064 ATP6V1G1O75348 118 aa9.62□□□□□ -0.87
KDM3A-202ENST00000409064 HOXB6P17509 224 aaKnown RBP9.62□□□□□ -0.87
KDM3A-202ENST00000409064 MMP12P39900 470 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms