RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 GPR50Q13585 617 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 CDH18Q13634 790 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 CARTPTQ16568 116 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZNF672Q499Z4 452 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 GTDC1Q4AE62 458 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 CT45A2Q5DJT8 189 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 HERC4Q5GLZ8 1057 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 PRAMEF7Q5VXH5 474 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 LEKR1Q6ZMV7 388 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 FAM43BQ6ZT52 329 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 SH2D5Q6ZV89 423 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 ADAMTSL2Q86TH1 951 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 TEX26Q8N6G2 289 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 TRPV3Q8NET8 790 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 OR4D10Q8NGI6 311 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 OR13C5Q8NGS8 318 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 LMO3Q8TAP4 145 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 GLYATL1Q969I3 302 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 ALG14Q96F25 216 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 LURAP1Q96LR2 239 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 SAMD8Q96LT4 415 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 S1PR3Q99500 378 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 RAB17Q9H0T7 212 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 EGLN3Q9H6Z9 239 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZNF624Q9P2J8 865 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 PLEKHA6Q9Y2H5 1048 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 KIF3AQ9Y496 699 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 ETV7Q9Y603 341 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 KIF1AQ12756 1690 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 PCDH11XQ9BZA7 1347 aa4.21□□□□□ -1.73
HMGB3P18-201ENST00000406327 ABCC6O95255 1503 aa4.21□□□□□ -1.73
HMGB3P18-201ENST00000406327 SNURFLB1AK76 121 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 SMIM1B2RUZ4 78 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF732B4DXR9 585 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM72CH0Y354 149 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 PCDH7O60245 1069 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 NME2P1O60361 137 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 STBD1O95210 358 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 TGFAP01135 160 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 GPIP06744 558 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 CHRNGP07510 517 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 APRTP07741 180 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 NUDT17P0C025 328 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 PLA2G2AP14555 144 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 ACKR3P25106 362 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 SLC6A12P48065 614 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 CAMLGP49069 296 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 CCR4P51679 360 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 GEMP55040 296 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 POLR2FP61218 127 aaKnown RBP4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 CNTN1Q12860 1018 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 DPYSQ14117 519 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 SPHARQ15513 63 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZRSR1Q15695 479 aaKnown RBP4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 EXT1Q16394 746 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 RABL6Q3YEC7 729 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF585BQ52M93 769 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 ATP1A1-AS1Q5TC04 95 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM72AQ5TYM5 149 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 RAET1GQ6H3X3 334 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR6B2Q6IFH4 312 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM72DQ6L9T8 149 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 CWC27Q6UX04 472 aaKnown RBP4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 C17orf107Q6ZR85 190 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 CDHR3Q6ZTQ4 885 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 RFPL4BQ6ZWI9 263 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 SLC26A9Q7LBE3 791 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 TRMT1LQ7Z2T5 733 aaKnown RBP4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 FAM72BQ86X60 149 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 TCEANCQ8N8B7 351 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR5T2Q8NGG2 359 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR10G8Q8NGN5 311 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 OR4C3Q8NH37 302 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 SAP25Q8TEE9 199 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 UBTD2Q8WUN7 234 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 APOBEC4Q8WW27 367 aaKnown RBP4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 CASP10Q92851 521 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 NXPE2Q96DL1 559 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 BPIFA2Q96DR5 249 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 C10orf90Q96M02 699 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF577Q9BSK1 485 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 WACQ9BTA9 647 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 NUSAP1Q9BXS6 441 aaKnown RBP4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 PLEK2Q9NYT0 353 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 ZNF319Q9P2F9 582 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 PLA2G4CQ9UP65 541 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 ATP6V0A2Q9Y487 856 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 AP1M2Q9Y6Q5 423 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 LMO7Q8WWI1 1683 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 TRIP12Q14669 1992 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 UBE4BO95155 1302 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 RAD50Q92878 1312 aa4.21□□□□□ -1.74
HMGB3P18-201ENST00000406327 CAMTA1Q9Y6Y1 1673 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 TRBV4-1A0A0J9YWV2 114 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 IQCMA0A1B0GVH7 501 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 MTMR11A4FU01 709 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 RGSL1A5PLK6 1076 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 HIP1O00291 1037 aa4.2□□□□□ -1.74
HMGB3P18-201ENST00000406327 SAP30O75446 220 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms