RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 DDX6P26196 483 aaKnown RBP eCLIP9.35□□□□□ -0.91
MSH2-202ENST00000406134 BMPR1AP36894 532 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 SLC6A11P48066 632 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 LRIT3Q3SXY7 679 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 PLAG1Q6DJT9 500 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 ERAP2Q6P179 960 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 TUBA3EQ6PEY2 450 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 LINC01555Q8NAE3 123 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 UTP15Q8TED0 518 aaKnown RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 HPS1Q92902 700 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 TMEM19Q96HH6 336 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 TXNDC15Q96J42 360 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 DPEP2Q9H4A9 486 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 CPNE5Q9HCH3 593 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 ABCB10Q9NRK6 738 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 C17orf113A0A1B0GUU1 675 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 KIAA0513O60268 411 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 FKTNO75072 461 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 ADH1AP07327 375 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 ITGB7P26010 798 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 MAPK9P45984 424 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 MAN2A2P49641 1150 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 EIF2B2P49770 351 aaKnown RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 SNRPGP62308 76 aaKnown RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 DUSP2Q05923 314 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 TSTQ16762 297 aaKnown RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 FBXO43Q4G163 708 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 PGBD2Q6P3X8 592 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 UNC5DQ6UXZ4 953 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 CELF5Q8N6W0 485 aaKnown RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 TP53INP1Q96A56 240 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 ZNF707Q96C28 371 aaPredicted RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 REPS1Q96D71 796 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 NUS1Q96E22 293 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 CHCHD6Q9BRQ6 235 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 TEX10Q9NXF1 929 aaPredicted RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 RAB23Q9ULC3 237 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 LOC100506127A0A0U1RQW1 187 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 FEZF1A0PJY2 475 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 ISPDA4D126 451 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 HAT1O14929 419 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 MMP20O60882 483 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 CNOT3O75175 753 aaKnown RBP9.34□□□□□ -0.91
MSH2-202ENST00000406134 BCHEP06276 602 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 EPCAMP16422 314 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 PTPN2P17706 415 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 SOX3P41225 446 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 SNRPNP63162 240 aaKnown RBP9.34□□□□□ -0.91
MSH2-202ENST00000406134 IFITM2Q01629 132 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 ZNF79Q15937 498 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 PRAMEF14Q5SWL7 426 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 PRAMEF13Q5VWM6 474 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 SLX4IPQ5VYV7 408 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 DESI1Q6ICB0 168 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 SPATC1Q76KD6 591 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 ZNF765Q7L2R6 523 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 CLIP4Q8N3C7 705 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 MRPL43Q8N983 215 aaKnown RBP9.34□□□□□ -0.91
MSH2-202ENST00000406134 ING5Q8WYH8 240 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 HTRA1Q92743 480 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 F2RL3Q96RI0 385 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 YME1L1Q96TA2 773 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 WASH6PQ9NQA3 447 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 CCDC177Q9NQR7 707 aaPredicted RBP9.34□□□□□ -0.91
MSH2-202ENST00000406134 POU2F3Q9UKI9 436 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 LRP4O75096 1905 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 SH3D21A4FU49 640 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 CTDSP2O14595 271 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 LRRTM2O43300 516 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 SOX14O95416 240 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 NTN1O95631 604 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 CLTBP09497 229 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 DDX5P17844 614 aaKnown RBP9.34□□□□□ -0.91
MSH2-202ENST00000406134 SEPHS1P49903 392 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 HYAL2Q12891 473 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 KCNJ8Q15842 424 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 ZMAT1Q5H9K5 638 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 REEP3Q6NUK4 255 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 TNFAIP8L2Q6P589 184 aaPredicted RBP9.34□□□□□ -0.91
MSH2-202ENST00000406134 TRIM40Q6P9F5 258 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 TMIGD1Q6UXZ0 262 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 ZNF793Q6ZN11 406 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 ERN2Q76MJ5 926 aaKnown RBP9.34□□□□□ -0.91
MSH2-202ENST00000406134 PDZD3Q86UT5 571 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 TRAPPC5Q8IUR0 188 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 CELF2-AS1Q8N7Q2 184 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 ASB15Q8WXK1 588 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 RAB8BQ92930 207 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 MGLLQ99685 303 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 C6orf62Q9GZU0 229 aaPredicted RBP9.34□□□□□ -0.91
MSH2-202ENST00000406134 TMEM245Q9H330 911 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 C11orf16Q9NQ32 467 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 ATP11BQ9Y2G3 1177 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 SLC27A6Q9Y2P4 619 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 TMEM98Q9Y2Y6 226 aa9.34□□□□□ -0.91
MSH2-202ENST00000406134 A0A1W2PS29 197 aa9.33□□□□□ -0.92
MSH2-202ENST00000406134 CAPN5O15484 640 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms