RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 GPR37L1O60883 481 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 IFNGP01579 166 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 PTNP21246 168 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 ARSFP54793 590 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 TOP3AQ13472 1001 aaPredicted RBP8.65□□□□□ -1.02
LIG4-202ENST00000405925 DAG1Q14118 895 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 SMU1Q2TAY7 513 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 FLYWCH1Q4VC44 716 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 BROXQ5VW32 411 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 FIGNL1Q6PIW4 674 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 SMARCD3Q6STE5 483 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 COMMD2Q86X83 199 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 CRIPAKQ8N1N5 446 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 OR9A4Q8NGU2 314 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 MOAP1Q96BY2 351 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 SERINC2Q96SA4 455 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 PRRG4Q9BZD6 226 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 TBC1D23Q9NUY8 699 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 WSB2Q9NYS7 404 aaPredicted RBP8.65□□□□□ -1.02
LIG4-202ENST00000405925 MKL2Q9ULH7 1088 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 NAALAD2Q9Y3Q0 740 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 TTC28Q96AY4 2481 aa8.65□□□□□ -1.02
LIG4-202ENST00000405925 ELOA3DA6NLF2 546 aaPredicted RBP8.65□□□□□ -1.03
LIG4-202ENST00000405925 KRT33AO76009 404 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 TSPAN19P0C672 248 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 LINGO3P0C6S8 592 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 GSTM2P28161 218 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 HTR1EP28566 365 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 RBBP4Q09028 425 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 ELOA3BQ3SY89 546 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 THAP5Q7Z6K1 395 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 ELOA3Q8NG57 546 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 ATOH1Q92858 354 aaPredicted RBP8.65□□□□□ -1.03
LIG4-202ENST00000405925 RIT1Q92963 219 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 TAPBPLQ9BX59 468 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 C11orf16Q9NQ32 467 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 RHCGQ9UBD6 479 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 PPIL1Q9Y3C6 166 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 MYOFQ9NZM1 2061 aa8.65□□□□□ -1.03
LIG4-202ENST00000405925 GABRR3A8MPY1 467 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 TOR1BO14657 336 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 HAT1O14929 419 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 LDB3O75112 727 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 UGT2B11O75310 529 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 ANXA8P13928 327 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 DDCP20711 480 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 AHRP35869 848 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 XCR1P46094 333 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 CLCA4Q14CN2 919 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 GGTA1PQ4G0N0 100 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 CRB2Q5IJ48 1285 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 RNF111Q6ZNA4 994 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 ARL14Q8N4G2 192 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 OR2T11Q8NH01 316 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 RSC1A1Q92681 617 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 ZUFSPQ96AP4 578 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 MIEF2Q96C03 454 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 FCRL4Q96PJ5 515 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 LPAR4Q99677 370 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 DEFB126Q9BYW3 111 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 SLC6A16Q9GZN6 736 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 PITHD1Q9GZP4 211 aaPredicted RBP8.64□□□□□ -1.03
LIG4-202ENST00000405925 EHD1Q9H4M9 534 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 ALKBH4Q9NXW9 302 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 ERGIC3Q9Y282 383 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 LOC100506127A0A0U1RQW1 187 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 K7EQS6 105 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 OR6B1O95007 311 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 ANGPTL1O95841 491 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 PRG2P13727 222 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 AHCYP23526 432 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 DNAJA1P31689 397 aaKnown RBP8.64□□□□□ -1.03
LIG4-202ENST00000405925 MC3RP41968 323 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 GRK6P43250 576 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 TMED1Q13445 227 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 IHHQ14623 411 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 HACD2Q6Y1H2 254 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 CYHR1Q6ZMK1 362 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 ERMP1Q7Z2K6 904 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 MAVSQ7Z434 540 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 NLRP8Q86W28 1048 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 C19orf43Q9BQ61 176 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 PELOQ9BRX2 385 aaKnown RBP8.64□□□□□ -1.03
LIG4-202ENST00000405925 TM9SF3Q9HD45 589 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 EHD3Q9NZN3 535 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 MKLN1Q9UL63 735 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 CPSF4LA6NMK7 179 aaKnown RBP8.64□□□□□ -1.03
LIG4-202ENST00000405925 METTL12A8MUP2 240 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 TSPAN12O95859 305 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 PRKACGP22612 351 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 PKLRP30613 574 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 DPP6P42658 865 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 OR1D4P47884 311 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 CSNK1G2P78368 415 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 KCNC4Q03721 635 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 LGALS3BPQ08380 585 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 NKAIN2Q5VXU1 208 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 SH2D5Q6ZV89 423 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 PARP8Q8N3A8 854 aa8.64□□□□□ -1.03
LIG4-202ENST00000405925 OR6C4Q8NGE1 309 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms