RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 VN1R5Q7Z5H4 357 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 NLGN4XQ8N0W4 816 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 CLIP4Q8N3C7 705 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 ZNF740Q8NDX6 193 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 VN1R2Q8NFZ6 395 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 OR9Q1Q8NGQ5 310 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 RAD51AP1Q96B01 352 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 VWCEQ96DN2 955 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 ZNF354BQ96LW1 612 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 WDFY2Q96P53 400 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 IL4I1Q96RQ9 567 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 ZNF607Q96SK3 696 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 KCNS3Q9BQ31 491 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 CNPPD1Q9BV87 410 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 RHBGQ9H310 441 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 C11orf16Q9NQ32 467 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 FBXL12Q9NXK8 326 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 SAGE1Q9NXZ1 904 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 ACAD8Q9UKU7 415 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 STUB1Q9UNE7 303 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 SLC35F4A4IF30 521 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 ANKDD1BA6NHY2 528 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 PDPK1O15530 556 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 CSO75390 466 aaKnown RBP10.21□□□□□ -0.78
CLIP4-204ENST00000404424 UGT2B17O75795 530 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 MAGP20916 626 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 KELP23276 732 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 CXCR2P25025 360 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 GSTM5P46439 218 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 KCNJ5P48544 419 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 PRMT2P55345 433 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 COPZ1P61923 177 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 DEFB103AP81534 67 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 ALDH6A1Q02252 535 aaKnown RBP10.21□□□□□ -0.78
CLIP4-204ENST00000404424 TEAD2Q15562 447 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF77Q15935 545 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 POM121L1PQ3SYA9 428 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 MFSD4BQ5TF39 518 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF544Q6NX49 715 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 SLC34A3Q8N130 599 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 NANOGP1Q8N7R0 232 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 GPR32P1Q8NGA4 272 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 OR2L2Q8NH16 312 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF764Q96H86 408 aaPredicted RBP10.21□□□□□ -0.78
CLIP4-204ENST00000404424 QRFPRQ96P65 431 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 EXOSC4Q9NPD3 245 aaKnown RBP10.21□□□□□ -0.78
CLIP4-204ENST00000404424 CREBZFQ9NS37 354 aa10.21□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF670-ZNF695F2Z2N8 137 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 H3BN98 237 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 PLPP1O14494 284 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 POP7O75817 140 aaKnown RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 CCNKO75909 580 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 CXCL14O95715 111 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 PTPN2P17706 415 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 S100A1P23297 94 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 ITGB7P26010 798 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 RPS19P39019 145 aaKnown RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 FRKP42685 505 aaPredicted RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 CRYBB2P43320 205 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 GPR1P46091 355 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 MAPK12P53778 367 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 WDR5P61964 334 aaKnown RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 RUNX1T1Q06455 604 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 COX10Q12887 443 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 MLLT11Q13015 90 aaPredicted RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 C1DQ13901 141 aaKnown RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 ARHGEF6Q15052 776 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 CARTPTQ16568 116 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 LEXMQ3ZCV2 418 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 RPS26P11Q5JNZ5 115 aaPredicted RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 SLC25A30Q5SVS4 291 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 KHDRBS2Q5VWX1 349 aaKnown RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 TNFAIP8L2Q6P589 184 aaPredicted RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 SLC39A5Q6ZMH5 540 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 C6orf120Q7Z4R8 191 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 LINC00471Q8N535 108 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 TM4SF18Q96CE8 201 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 NUS1Q96E22 293 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 TCEAL4Q96EI5 215 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 ZNF486Q96H40 463 aaPredicted RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 ZDHHC5Q9C0B5 715 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 POLR2J3Q9H1A7 115 aaKnown RBP10.2□□□□□ -0.78
CLIP4-204ENST00000404424 MIR1-1HGQ9H1L0 117 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 MTG2Q9H4K7 406 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 PELI2Q9HAT8 420 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 HCFC1R1Q9NWW0 138 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 NDUFB11Q9NX14 153 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 ITM2BQ9Y287 266 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 PCDHGB2Q9Y5G2 931 aa10.2□□□□□ -0.78
CLIP4-204ENST00000404424 FAM227AF5H4B4 570 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 KPNA3O00505 521 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-204ENST00000404424 CAPN5O15484 640 aaPredicted RBP10.19□□□□□ -0.78
CLIP4-204ENST00000404424 PAPLNO95428 1278 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 PRNPP04156 253 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 KRT8P05787 483 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 PCBP4P57723 403 aaKnown RBP10.19□□□□□ -0.78
CLIP4-204ENST00000404424 ST8SIA6P61647 398 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 TLE2Q04725 743 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 TP53BP2Q13625 1128 aa10.19□□□□□ -0.78
CLIP4-204ENST00000404424 SEC23BQ15437 767 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms