RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 EIF3LQ9Y262 564 aaKnown RBP27.53■■■□□ 2
USP42-202ENST00000404008 ITPR1Q14643 2758 aa27.52■■■□□ 2
USP42-202ENST00000404008 A0A1W2PQ72 361 aa27.52■■■□□ 2
USP42-202ENST00000404008 PRPS2P11908 318 aa27.52■■■□□ 2
USP42-202ENST00000404008 FOLH1Q04609 750 aa27.52■■■□□ 2
USP42-202ENST00000404008 C2orf80Q0P641 193 aa27.52■■■□□ 2
USP42-202ENST00000404008 ATP1A4Q13733 1029 aa27.52■■■□□ 2
USP42-202ENST00000404008 SLC48A1Q6P1K1 146 aa27.52■■■□□ 2
USP42-202ENST00000404008 PARP9Q8IXQ6 854 aa27.52■■■□□ 2
USP42-202ENST00000404008 OR11G2Q8NGC1 345 aa27.52■■■□□ 2
USP42-202ENST00000404008 SNRNP27Q8WVK2 155 aaKnown RBP27.52■■■□□ 2
USP42-202ENST00000404008 TSSK3Q96PN8 268 aa27.52■■■□□ 2
USP42-202ENST00000404008 ZNF317Q96PQ6 595 aaPredicted RBP27.52■■■□□ 2
USP42-202ENST00000404008 OR52B2Q96RD2 323 aa27.52■■■□□ 2
USP42-202ENST00000404008 BAIAP2L1Q9UHR4 511 aa27.52■■■□□ 2
USP42-202ENST00000404008 ALDH9A1P49189 494 aa27.51■■□□□ 1.99
USP42-202ENST00000404008 IDH3AP50213 366 aa27.51■■□□□ 1.99
USP42-202ENST00000404008 IGLV3-21P80748 117 aaPredicted RBP27.51■■□□□ 1.99
USP42-202ENST00000404008 STX4Q12846 297 aa27.51■■□□□ 1.99
USP42-202ENST00000404008 CPEB2Q7Z5Q1 589 aaKnown RBP27.51■■□□□ 1.99
USP42-202ENST00000404008 OR4N5Q8IXE1 308 aa27.51■■□□□ 1.99
USP42-202ENST00000404008 NPHS2Q9NP85 383 aa27.51■■□□□ 1.99
USP42-202ENST00000404008 P4HTMQ9NXG6 502 aa27.51■■□□□ 1.99
USP42-202ENST00000404008 C5AR2Q9P296 337 aa27.51■■□□□ 1.99
USP42-202ENST00000404008 EXO1Q9UQ84 846 aaKnown RBP27.51■■□□□ 1.99
USP42-202ENST00000404008 MGAQ8IWI9 3026 aa27.51■■□□□ 1.99
USP42-202ENST00000404008 PTPRQQ9UMZ3 2332 aa27.51■■□□□ 1.99
USP42-202ENST00000404008 SYNDIG1LA6NDD5 238 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 PEX12O00623 359 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 GPR75O95800 540 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 DDCP20711 480 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 ASMTP46597 345 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 ID2Q02363 134 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 EEF1A2Q05639 463 aaKnown RBP27.5■■□□□ 1.99
USP42-202ENST00000404008 PTGR1Q14914 329 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 NXNQ6DKJ4 435 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 CLHC1Q8NHS4 586 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 THOC1Q96FV9 657 aaKnown RBP27.5■■□□□ 1.99
USP42-202ENST00000404008 SIKE1Q9BRV8 207 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 ALOXE3Q9BYJ1 711 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 ZNF700Q9H0M5 742 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 EHD3Q9NZN3 535 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 POLHQ9Y253 713 aa27.5■■□□□ 1.99
USP42-202ENST00000404008 IGHV1-45A0A0A0MS14 117 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 ALDOCP09972 364 aaKnown RBP27.49■■□□□ 1.99
USP42-202ENST00000404008 G6PDP11413 515 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 COX6A1P12074 109 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 DIO3P55073 304 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 CXADRP78310 365 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 SERTAD2Q14140 314 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 ST3GAL2Q16842 350 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 SPATA19Q7Z5L4 167 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 CEP70Q8NHQ1 597 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 RFWD2Q8NHY2 731 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 VPS50Q96JG6 964 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 EBF4Q9BQW3 602 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 TRIM55Q9BYV6 548 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 FBXL4Q9UKA2 621 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 CROCCQ5TZA2 2017 aa27.49■■□□□ 1.99
USP42-202ENST00000404008 POLR3GO15318 223 aaPredicted RBP27.48■■□□□ 1.99
USP42-202ENST00000404008 OR4D2P58180 307 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 BIKQ13323 160 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 PCOLCEQ15113 449 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 LSM12Q3MHD2 195 aaKnown RBP27.48■■□□□ 1.99
USP42-202ENST00000404008 SFT2D3Q587I9 215 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 CGB2Q6NT52 195 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 ACAD11Q709F0 780 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 C7orf57Q8NEG2 295 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 OR4K14Q8NGD5 310 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 STON2Q8WXE9 905 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 IGHV3-20A0A0C4DH32 117 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 MYOCOSA0A1B0GUC4 107 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 LRATO95237 230 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 PIK3R1P27986 724 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 ACTN3Q08043 901 aaPredicted RBP27.48■■□□□ 1.99
USP42-202ENST00000404008 NDUFAF7Q7L592 441 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 GFM2Q969S9 779 aaKnown RBP27.48■■□□□ 1.99
USP42-202ENST00000404008 KLHL29Q96CT2 875 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 CATSPER2Q96P56 530 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 WDR77Q9BQA1 342 aaPredicted RBP27.48■■□□□ 1.99
USP42-202ENST00000404008 TCF7L2Q9NQB0 619 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 MIEF1Q9NQG6 463 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 DCTN4Q9UJW0 460 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 UTS2RQ9UKP6 389 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 PSME2Q9UL46 239 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 MAN2B2Q9Y2E5 1009 aa27.48■■□□□ 1.99
USP42-202ENST00000404008 PKD1L2Q7Z442 2459 aa27.47■■□□□ 1.99
USP42-202ENST00000404008 TROVE2P10155 538 aaKnown RBP eCLIP27.47■■□□□ 1.99
USP42-202ENST00000404008 LSP1P33241 339 aa27.47■■□□□ 1.99
USP42-202ENST00000404008 TICAM1Q8IUC6 712 aa27.47■■□□□ 1.99
USP42-202ENST00000404008 CHMP6Q96FZ7 201 aa27.47■■□□□ 1.99
USP42-202ENST00000404008 CCDC28BQ9BUN5 200 aa27.47■■□□□ 1.99
USP42-202ENST00000404008 REEP4Q9H6H4 257 aa27.47■■□□□ 1.99
USP42-202ENST00000404008 KCNK13Q9HB14 408 aa27.47■■□□□ 1.99
USP42-202ENST00000404008 A0A1W2PS29 197 aa27.46■■□□□ 1.99
USP42-202ENST00000404008 AKAP10O43572 662 aa27.46■■□□□ 1.99
USP42-202ENST00000404008 SEC24DO94855 1032 aaPredicted RBP27.46■■□□□ 1.99
USP42-202ENST00000404008 STT3AP46977 705 aa27.46■■□□□ 1.99
USP42-202ENST00000404008 XKP51811 444 aa27.46■■□□□ 1.99
USP42-202ENST00000404008 DEFB109BQ30KR1 87 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms