RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 MBD3L5A6NJ08 208 aaPredicted RBP10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SDR42E2A6NKP2 422 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 DEFB108AA8MXU0 73 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 EEF1E1-BLOC1S5C9J1V9 151 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 EEF1E1O43324 174 aaKnown RBP10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ACSL3O95573 720 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 AHSGP02765 367 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CTSSP25774 331 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ANP32AP39687 249 aaKnown RBP10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 GDF5P43026 501 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 RGS4P49798 205 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 AP1S2P56377 157 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TTC27Q6P3X3 843 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ABHD17CQ6PCB6 329 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 C4orf22Q6V702 233 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TMEM64Q6YI46 380 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 P3H2Q8IVL5 708 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 OR4N5Q8IXE1 308 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 LRRC75A-AS1Q8N1F1 130 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 RASGEF1CQ8N431 466 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SIMC1Q8NDZ2 872 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MBD3L2Q8NHZ7 208 aaPredicted RBP10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SLC44A1Q8WWI5 657 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 DAZLQ92904 295 aaKnown RBP10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SPACA9Q96E40 222 aaPredicted RBP10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 WDYHV1Q96HA8 205 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 DACH2Q96NX9 599 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MAPKAP1Q9BPZ7 522 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PIGQQ9BRB3 760 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 UBQLN3Q9H347 655 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PRDM7Q9NQW5 492 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 GALNT8Q9NY28 637 aa10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 C6orf203Q9P0P8 240 aaPredicted RBP10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ZNF490Q9ULM2 529 aaPredicted RBP10.89□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SH3D21A4FU49 640 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CD8B2A6NJW9 211 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CDC7O00311 574 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 B3GALT2O43825 422 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CRLF1O75462 422 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 IL2RAP01589 272 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 C1QAP02745 245 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CLPSP04118 112 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 HIST1H2AGP0C0S8 130 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 FBXO45P0C2W1 286 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 NID1P14543 1247 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CR1P17927 2039 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 HIST1H2ADP20671 130 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 LOXP28300 417 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 KCNJ2P63252 427 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 GPS1Q13098 491 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SLBPQ14493 270 aaKnown RBP eCLIP10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 BBS9Q3SYG4 887 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 EIPR1Q53HC9 387 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ARMC3Q5W041 872 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 VASNQ6EMK4 673 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 LRRC8EQ6NSJ5 796 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PRSS57Q6UWY2 283 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 GSTA5Q7RTV2 222 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 KIF18BQ86Y91 864 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PALM2Q8IXS6 379 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TBC1D19Q8N5T2 526 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 NUBPLQ8TB37 319 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 IGFBPL1Q8WX77 278 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SMPDL3BQ92485 455 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PPWD1Q96BP3 646 aaKnown RBP10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 NTNG2Q96CW9 530 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PERPQ96FX8 193 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SENP5Q96HI0 755 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 HIST1H2AHQ96KK5 128 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 JSRP1Q96MG2 331 aaPredicted RBP10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 F2RL3Q96RI0 385 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TRIB1Q96RU8 372 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 PIP5K1AQ99755 562 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 HIST1H2AJQ99878 128 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 H2AFJQ9BTM1 129 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 RBM24Q9BX46 236 aaKnown RBP10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 UGT2B28Q9BY64 529 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TRIM5Q9C035 493 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 QPCTLQ9NXS2 382 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TAS2R13Q9NYV9 303 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 DYRK1BQ9Y463 629 aa10.88□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ALPK2Q86TB3 2170 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 WASHC1A8K0Z3 465 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 RTCAO00442 366 aaKnown RBP10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 ARHGEF9O43307 516 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 FGF17O60258 216 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 SMPD2O60906 423 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 BANF1O75531 89 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 GOSR1O95249 250 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 C1GALT1C1LP0DN25 315 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 MLNP12872 115 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 BMP7P18075 431 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TNNI3P19429 210 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CD22P20273 847 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CDK9P50750 372 aaKnown RBP10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 STXBP1P61764 594 aaKnown RBP10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 IGLV3-21P80748 117 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 KIF5AQ12840 1032 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 CBLBQ13191 982 aa10.87□□□□□ -0.67
SPTLC1P3-201ENST00000403408 TMIGD1Q6UXZ0 262 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms