RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 IDO1P14902 403 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 MDH1P40925 334 aaKnown RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 RAB8AP61006 207 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 SRSF11Q05519 484 aaKnown RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 FBXO48Q5FWF7 155 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 DCAF10Q5QP82 559 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 C1orf189Q5VU69 101 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 B3GNTL1Q67FW5 361 aaPredicted RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 ADNP2Q6IQ32 1131 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 TCTN3Q6NUS6 607 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ANKRD42Q8N9B4 389 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 OR4K14Q8NGD5 310 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 CEP70Q8NHQ1 597 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 GOT1L1Q8NHS2 421 aaPredicted RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 APIPQ96GX9 242 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 CNTNAP3BQ96NU0 1288 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 LPAR4Q99677 370 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 CNTNAP3Q9BZ76 1288 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 LHPPQ9H008 270 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 FARSBQ9NSD9 589 aaKnown RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 GIMAP4Q9NUV9 329 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 P4HTMQ9NXG6 502 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 PTGFRNQ9P2B2 879 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 IL17BQ9UHF5 180 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 USH1CQ9Y6N9 552 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 SCN2AQ99250 2005 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 FFAR3O14843 346 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ANKRD28O15084 1053 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 GPR42O15529 346 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 PLOD3O60568 738 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ANXA4P09525 319 aaPredicted RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 NAGAP17050 411 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 SDC1P18827 310 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 PLA2G16P53816 162 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 SLC26A5P58743 744 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 MYBPC3Q14896 1274 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 MPEG1Q2M385 716 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 COQ5Q5HYK3 327 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 NDUFAF5Q5TEU4 345 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 PRAMEF17Q5VTA0 474 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 B3GNT7Q8NFL0 401 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 PEX11GQ96HA9 241 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 KCNA7Q96RP8 456 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 SECISBP2Q96T21 854 aaKnown RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 PRPF18Q99633 342 aaKnown RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 MRPL1Q9BYD6 325 aaKnown RBP7.05□□□□□ -1.28
USP16-204ENST00000399976 HCN3Q9P1Z3 774 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 MAN2B2Q9Y2E5 1009 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 ATG4BQ9Y4P1 393 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 TIMM22Q9Y584 194 aa7.05□□□□□ -1.28
USP16-204ENST00000399976 CNOT1A5YKK6 2376 aaKnown RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 SCAMP2O15127 329 aaKnown RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 TO15178 435 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 SERPIND1P05546 499 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 KLK1P06870 262 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 CPMP14384 443 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 PORP16435 677 aaPredicted RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 PIK3R1P27986 724 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 NEK2P51955 445 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 NR6A1Q15406 480 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 TBR1Q16650 682 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 ZCCHC23Q6ZST2 131 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 MYLK4Q86YV6 388 aaPredicted RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 CPSF7Q8N684 471 aaKnown RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 OR1N1Q8NGS0 311 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 TM9SF4Q92544 642 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 ZNF354BQ96LW1 612 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 ZNF317Q96PQ6 595 aaPredicted RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 RABEP2Q9H5N1 569 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 ZNF385DQ9H6B1 395 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 NEUROD4Q9HD90 331 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 SDR39U1Q9NRG7 319 aaPredicted RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 FAM120CQ9NX05 1096 aaKnown RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 KLHL14Q9P2G3 628 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 MKL2Q9ULH7 1088 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 NSG1A0A0A6YYJ2 146 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 RNASET2O00584 256 aaKnown RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 SEC22BO75396 215 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 KRT16P08779 473 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 BCKDHAP12694 445 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 WT1P19544 449 aaPredicted RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 EFNA3P52797 238 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 SNRPNP63162 240 aaKnown RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 ANXA8L1Q5VT79 327 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 MLIPQ5VWP3 458 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 FAM91A1Q658Y4 838 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 CLEC6AQ6EIG7 209 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 ACAD11Q709F0 780 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 RPS27LQ71UM5 84 aaKnown RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 LRRC25Q8N386 305 aaPredicted RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 ZNF441Q8N8Z8 693 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 FAM47BQ8NA70 645 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 CLEC1AQ8NC01 280 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 OR5T3Q8NGG3 340 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 PMM1Q92871 262 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 CLMPQ9H6B4 373 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 AKIRIN1Q9H9L7 192 aaPredicted RBP7.04□□□□□ -1.28
USP16-204ENST00000399976 SLC35C2Q9NQQ7 365 aa7.04□□□□□ -1.28
USP16-204ENST00000399976 BTNL2Q9UIR0 455 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms