RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 MITFO75030 526 aaPredicted RBP13.36□□□□□ -0.27
SCAF4-202ENST00000399804 BMP1P13497 986 aa13.36□□□□□ -0.27
SCAF4-202ENST00000399804 CLCN2P51788 898 aa13.36□□□□□ -0.27
SCAF4-202ENST00000399804 SMARCD3Q6STE5 483 aa13.36□□□□□ -0.27
SCAF4-202ENST00000399804 ETFBKMTQ8IXQ9 262 aa13.36□□□□□ -0.27
SCAF4-202ENST00000399804 FEVQ99581 238 aa13.36□□□□□ -0.27
SCAF4-202ENST00000399804 FOSL2P15408 326 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 ZNF267Q14586 743 aaPredicted RBP13.35□□□□□ -0.27
SCAF4-202ENST00000399804 SYT16Q17RD7 645 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 ZBED5Q49AG3 693 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 WDR45BQ5MNZ6 344 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 KIAA1211LQ6NV74 962 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 CDC73Q6P1J9 531 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 TMEM102Q8N9M5 508 aaPredicted RBP13.35□□□□□ -0.27
SCAF4-202ENST00000399804 PDXPQ96GD0 296 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 OSBPL10Q9BXB5 764 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 UCK2Q9BZX2 261 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 HMG20AQ9NP66 347 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 FAM118AQ9NWS6 357 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 FAM86C2PA6NEL3 165 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 MPZL2O60487 215 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 B3GALT4O96024 378 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 PTNP21246 168 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 TPMTP51580 245 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 EXOC3L2Q2M3D2 409 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 FAM214AQ32MH5 1076 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 EIPR1Q53HC9 387 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 C6orf141Q5SZD1 244 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 SYCE2Q6PIF2 218 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 P2RY8Q86VZ1 359 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 LRRC25Q8N386 305 aaPredicted RBP13.35□□□□□ -0.27
SCAF4-202ENST00000399804 CNIH3Q8TBE1 160 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 ZNF597Q96LX8 424 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 LIN28AQ9H9Z2 209 aaKnown RBP13.35□□□□□ -0.27
SCAF4-202ENST00000399804 CPNE7Q9UBL6 633 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 MRTO4Q9UKD2 239 aaKnown RBP13.35□□□□□ -0.27
SCAF4-202ENST00000399804 ZNF646O15015 1829 aaPredicted RBP13.35□□□□□ -0.27
SCAF4-202ENST00000399804 C7orf72A4D263 438 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 OTOL1A6NHN0 477 aaPredicted RBP13.35□□□□□ -0.27
SCAF4-202ENST00000399804 CPSF4LA6NMK7 179 aaKnown RBP13.35□□□□□ -0.27
SCAF4-202ENST00000399804 MED26O95402 600 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 GNAO1P09471 354 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 ITGADQ13349 1161 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 KIR2DS3Q14952 304 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 IQCCQ4KMZ1 466 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 OR8H2Q8N162 312 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 METTL21AQ8WXB1 218 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 OR1E3Q8WZA6 343 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 TPK1Q9H3S4 243 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 PTTG2Q9NZH5 202 aa13.35□□□□□ -0.27
SCAF4-202ENST00000399804 MBD1Q9UIS9 605 aaPredicted RBP13.35□□□□□ -0.27
SCAF4-202ENST00000399804 FAM47E-STBD1D6RA91 191 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 AP1G1O43747 822 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 HIST1H1TP22492 207 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-202ENST00000399804 HNRNPKP61978 463 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCAF4-202ENST00000399804 CSNK2BP67870 215 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 TUBA4AP68366 448 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 RPP38P78345 283 aaKnown RBP13.34□□□□□ -0.27
SCAF4-202ENST00000399804 PIGFQ07326 219 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 GK3PQ14409 553 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 RPS26P11Q5JNZ5 115 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-202ENST00000399804 SPANXN2Q5MJ10 180 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 PIP5K1AQ99755 562 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 PPT2Q9UMR5 302 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 TRPM6Q9BX84 2022 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 REM1O75628 298 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 SLC25A12O75746 678 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 APBB3O95704 486 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 CHRM5P08912 532 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-202ENST00000399804 SHC2P98077 582 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 MESP2Q0VG99 397 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 KCTD21Q4G0X4 260 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 AGBL4Q5VU57 503 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 OR2L8Q8NGY9 312 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.34□□□□□ -0.271e-323■■■■■ 61.3
SCAF4-202ENST00000399804 RELTQ969Z4 430 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 CCDC115Q96NT0 180 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 ZNF385DQ9H6B1 395 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 SERGEFQ9UGK8 458 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 CDC14AQ9UNH5 594 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 GSTK1Q9Y2Q3 226 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 ZNF99A8MXY4 864 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-202ENST00000399804 NDUFB5O43674 189 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 HPRP00739 348 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 ZNF888P0CJ79 500 aaPredicted RBP13.34□□□□□ -0.27
SCAF4-202ENST00000399804 SELENOWP63302 87 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 CAMK1Q14012 370 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 COLEC12Q5KU26 742 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 SLCO6A1Q86UG4 719 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 IL17RCQ8NAC3 791 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 CHTF18Q8WVB6 975 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 RNF31Q96EP0 1072 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 MRPL48Q96GC5 212 aaKnown RBP13.34□□□□□ -0.27
SCAF4-202ENST00000399804 CHCHD6Q9BRQ6 235 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 NDC1Q9BTX1 674 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 EVA1BQ9NVM1 165 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 MKLN1Q9UL63 735 aa13.34□□□□□ -0.27
SCAF4-202ENST00000399804 ST3GAL3Q11203 375 aa13.33□□□□□ -0.27
SCAF4-202ENST00000399804 TDGQ13569 410 aa13.33□□□□□ -0.27
SCAF4-202ENST00000399804 KBTBD8Q8NFY9 601 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms