RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TCP10LQ8TDR4 215 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MECRQ9BV79 373 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SLC29A3Q9BZD2 475 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ACPTQ9BZG2 426 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 RNF32Q9H0A6 362 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 AHSPQ9NZD4 102 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 VPS29Q9UBQ0 182 aa13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PPIEQ9UNP9 301 aaKnown RBP13.14□□□□□ -0.31
HLA-DQB1-202ENST00000399079 A0A1W2PS29 197 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 BLACEA4D250 179 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 GABRR3A8MPY1 467 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 C17orf105B2RV13 164 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PRKNO60260 465 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 NR2F6P10588 404 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TNNI3P19429 210 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SERPINB3P29508 390 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CLCN2P51788 898 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 IGLV3-21P80748 117 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 HMGCS1Q01581 520 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 KCNC4Q03721 635 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TUBA3CQ13748 450 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SERTAD2Q14140 314 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZNF468Q5VIY5 522 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TUBA3EQ6PEY2 450 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PAGE2Q7Z2X7 111 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TMEM132CQ8N3T6 1108 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 C1orf52Q8N6N3 182 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 DOK4Q8TEW6 326 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TANKQ92844 425 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SIGLEC12Q96PQ1 595 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SMC6Q96SB8 1091 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 GATA5Q9BWX5 397 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 DEFB126Q9BYW3 111 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 LIN28AQ9H9Z2 209 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 STK38LQ9Y2H1 464 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 COPG1Q9Y678 874 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SHANK1Q9Y566 2161 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 FLNCQ14315 2725 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TRAV17A0A0B4J275 112 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TCP11X1B4DZS4 312 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TRIM13O60858 407 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ENO1P06733 434 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TUBBP07437 444 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ALDH3A1P30838 453 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CD96P40200 585 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 STT3AP46977 705 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 UQCRFS1P47985 274 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MAPK12P53778 367 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SRSF11Q05519 484 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CSTF3Q12996 717 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CEP85LQ5SZL2 805 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 NDUFAF5Q5TEU4 345 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SPINK14Q6IE38 97 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 C16orf47Q6ZP98 133 aaPredicted RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MMP21Q8N119 569 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CHTF18Q8WVB6 975 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 DAZLQ92904 295 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 VMP1Q96GC9 406 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 RBM18Q96H35 190 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 OR8D2Q9GZM6 311 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ADAM29Q9UKF5 820 aa13.13□□□□□ -0.31
HLA-DQB1-202ENST00000399079 HRKO00198 91 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 RGS16O15492 202 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TYROBPO43914 113 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 VPS4BO75351 444 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 GPR75O95800 540 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 DDAH2O95865 285 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 HSD3B1P14060 373 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 HSD3B2P26439 372 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MLF1P58340 268 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 OC90Q02509 493 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CLEC6AQ6EIG7 209 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 OR14A16Q8NHC5 309 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SLC2A12Q8TD20 617 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 GRHL3Q8TE85 626 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 APIPQ96GX9 242 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 DGAT2Q96PD7 388 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 UTP23Q9BRU9 249 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 HES7Q9BYE0 225 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CENPHQ9H3R5 247 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 CLMPQ9H6B4 373 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 WDR41Q9HAD4 459 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 NMRK1Q9NWW6 199 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ABI3Q9P2A4 366 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 MID2Q9UJV3 735 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 VPS4AQ9UN37 437 aa13.12□□□□□ -0.31
HLA-DQB1-202ENST00000399079 SYNDIG1LA6NDD5 238 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 TMEM200CA6NKL6 621 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ALOX15P16050 662 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 GNLYP22749 145 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 NAA20P61599 178 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 RAE1P78406 368 aaKnown RBP13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 PLIN5Q00G26 463 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 BTKQ06187 659 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 OR1C1Q15619 314 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZNF750Q32MQ0 723 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ZCCHC23Q6ZST2 131 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 ATCAYQ86WG3 371 aa13.11□□□□□ -0.31
HLA-DQB1-202ENST00000399079 LGI4Q8N135 537 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms