RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 JSRP1Q96MG2 331 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZFP3Q96NJ6 502 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 APOBEC3BQ9UH17 382 aaKnown RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 GPR34Q9UPC5 381 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ABLIM3O94929 683 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 CYP17A1P05093 508 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 JUNDP17535 347 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 VEZF1Q14119 521 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 RAB39AQ14964 217 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 CES4AQ5XG92 561 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 LCTLQ6UWM7 567 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 PDZD3Q86UT5 571 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMEM173Q86WV6 379 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZFAND2BQ8WV99 257 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ISL2Q96A47 359 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ECHDC3Q96DC8 303 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ACPTQ9BZG2 426 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 EXOSC1Q9Y3B2 195 aaKnown RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 MYF6P23409 242 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 CRISP1P54107 249 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 ARHGAP19Q14CB8 494 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 CARTPTQ16568 116 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 UGT3A2Q3SY77 523 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 DNM1P34Q6PK57 102 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 FAM180AQ6UWF9 173 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 UTS2BQ765I0 119 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 C12orf40Q86WS4 652 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 DEFB119Q8N690 84 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 NEIL2Q969S2 332 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 TSACCQ96A04 125 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 FEVQ99581 238 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 INPP5KQ9BT40 448 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 MALT1Q9UDY8 824 aa13.6□□□□□ -0.23
PCDHGA11-201ENST00000398587 OXSR1O95747 527 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 AK1P00568 194 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 GABRA3P34903 492 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 CYP4V2Q6ZWL3 525 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 GAREM2Q75VX8 874 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMEM19Q96HH6 336 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 PELOQ9BRX2 385 aaKnown RBP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 PDE7BQ9NP56 450 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 DKK3Q9UBP4 350 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 ENTPD6O75354 484 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 RAB36O95755 333 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 PRLP01236 227 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 KLK3P07288 261 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 ACSL1P33121 698 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMEM107Q6UX40 140 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 SLC22A15Q8IZD6 547 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 CHST4Q8NCG5 386 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR52P1PQ8NH57 321 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 PTCHD1Q96NR3 888 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 LGR4Q9BXB1 951 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 C1QTNF1Q9BXJ1 281 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 SDHAF3Q9NRP4 125 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 ENPP4Q9Y6X5 453 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 MYO7AQ13402 2215 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 ANHXE9PGG2 379 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 AHSA1O95433 338 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 SEMA4FO95754 770 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 GP1BBP13224 206 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 PORP16435 677 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 HK1P19367 917 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 HNRNPA2B1P22626 353 aaKnown RBP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 OXTRP30559 389 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 PITPNAQ00169 270 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 PUM1Q14671 1186 aaKnown RBP eCLIP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 RGNQ15493 299 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 INAVAQ3KP66 663 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 FIGLAQ6QHK4 219 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 ADGRG5Q8IZF4 528 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 LSMEM2Q8N112 164 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 NETO1Q8TDF5 533 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 MED28Q9H204 178 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 DIABLOQ9NR28 239 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 LAMB2P55268 1798 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 GPR89AB7ZAQ6 455 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 J3QRK9 145 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 CCRL2O00421 344 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 GPR89BP0CG08 455 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF182P17025 639 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 SLC36A3Q495N2 470 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 PHF19Q5T6S3 580 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 NDUFAF5Q5TEU4 345 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 GALNT10Q86SR1 603 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 RASGRP3Q8IV61 690 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 G6PC3Q9BUM1 346 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 ASPNQ9BXN1 380 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 RBCK1Q9BYM8 510 aa13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 DNMT3BQ9UBC3 853 aaKnown RBP13.59□□□□□ -0.23
PCDHGA11-201ENST00000398587 MT-ND2P03891 347 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 PRLHRP49683 370 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 IST1P53990 364 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 MLLT1Q03111 559 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 RUNDC3AQ59EK9 446 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 TSPYL5Q86VY4 417 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 GALNT12Q8IXK2 581 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR2AJ1Q8NGZ0 328 aa13.58□□□□□ -0.24
PCDHGA11-201ENST00000398587 ADAD1Q96M93 576 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms