RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 TFECO14948 347 aaPredicted RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 ETHE1O95571 254 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CH25HO95992 272 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CTSAP10619 480 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 TEAD4Q15561 434 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 INAVAQ3KP66 663 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 ETFRF1Q6IPR1 90 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 KIAA1161Q6NSJ0 714 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 PET117Q6UWS5 81 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 Q6ZNB5 142 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SLC46A3Q7Z3Q1 461 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 MARCH9Q86YJ5 346 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 PLA2G15Q8NCC3 412 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 OR7G3Q8NG95 312 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 UBE2E3Q969T4 207 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 POLR2J3Q9H1A7 115 aaKnown RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 TIGARQ9NQ88 270 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 MAPRE3Q9UPY8 281 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 PCDHGA1Q9Y5H4 931 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 MYO15AQ9UKN7 3530 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 WDR81Q562E7 1941 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 PRAMEF33A0A0G2JMD5 474 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 ZW10O43264 779 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 PRAMEF10O60809 474 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 PTHP01270 115 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 OR12D1P0DN82 309 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 IMPA1P29218 277 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 MAT2AP31153 395 aaKnown RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 IRS1P35568 1242 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 NCBP2P52298 156 aaKnown RBP eCLIP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 WNT3P56703 355 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SRP54P61011 504 aaKnown RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SLC7A9P82251 487 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 GSTM4Q03013 218 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 PTGES3Q15185 160 aaKnown RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SYPL1Q16563 259 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 LEXMQ3ZCV2 418 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 GGTA1PQ4G0N0 100 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SLC16A12Q6ZSM3 486 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 COMMD6Q7Z4G1 85 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 IQCHQ86VS3 1027 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 ZCCHC10Q8TBK6 192 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF480Q8WV37 535 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 OR5P2Q8WZ92 322 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 RFT1Q96AA3 541 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 TESCQ96BS2 214 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 OR4K3Q96R72 315 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 FAIM2Q9BWQ8 316 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 ZCCHC3Q9NUD5 404 aaKnown RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 ANHXE9PGG2 379 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 TLX2O43763 284 aaPredicted RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 IDH3BO43837 385 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 FHP07954 510 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CD22P20273 847 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CCR2P41597 374 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 KCNJ10P78508 379 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 FGD2Q7Z6J4 655 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 TRMT2BQ96GJ1 504 aaKnown RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 PPP1R16AQ96I34 528 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 ZSCAN5AQ9BUG6 496 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 PRRG3Q9BZD7 231 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 BHLHE41Q9C0J9 482 aaPredicted RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 POLR2J2Q9GZM3 115 aaKnown RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SMURF1Q9HCE7 757 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 IL1RAPQ9NPH3 570 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 DMRT3Q9NQL9 472 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CDH7Q9ULB5 785 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SSR3Q9UNL2 185 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SH2B3Q9UQQ2 575 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CARNS1A5YM72 827 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 GLOD5A6NK44 160 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SOCS5O75159 536 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 ENTPD6O75354 484 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CLTBP09497 229 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 UQCRC2P22695 453 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CXCR2P25025 360 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 HOXA9P31269 272 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 MPIP34949 423 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 HOXC5Q00444 222 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 RIN1Q13671 783 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CEP78Q5JTW2 689 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 C1QTNF12Q5T7M4 302 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SLCO4C1Q6ZQN7 724 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 MSANTD1Q6ZTZ1 278 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CYP4Z2PQ8N1L4 340 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 MTERF3Q96E29 417 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 TRNT1Q96Q11 434 aaKnown RBP4.71□□□□□ -1.66
SMAD4-202ENST00000398417 SERHLQ9NQF3 203 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 CLEC4AQ9UMR7 237 aa4.71□□□□□ -1.66
SMAD4-202ENST00000398417 TRIM64CA6NLI5 447 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CTDSP2O14595 271 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 AREL1O15033 823 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 UGT2B17O75795 530 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 CCNYL3P0C7X3 344 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 C6P13671 934 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 SPNP16150 400 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 RCVRNP35243 200 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 PPM1AP35813 382 aa4.7□□□□□ -1.66
SMAD4-202ENST00000398417 MRPL19P49406 292 aaKnown RBP4.7□□□□□ -1.66
SMAD4-202ENST00000398417 XKP51811 444 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms