RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 DOC2AQ14183 400 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 OR4D1Q15615 310 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 ELAVL1Q15717 326 aaKnown RBP9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 ADPRMQ3LIE5 342 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 EMC4Q5J8M3 183 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 TMEM211Q6ICI0 200 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 ARHGAP11AQ6P4F7 1023 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 TRIM40Q6P9F5 258 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 ABHD17CQ6PCB6 329 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 HSDL2Q6YN16 418 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 CDH24Q86UP0 819 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 GPSM1Q86YR5 675 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 CREG2Q8IUH2 290 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 CCDC71Q8IV32 467 aaPredicted RBP9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 ZBED8Q8IZ13 594 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 TMEM132CQ8N3T6 1108 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 OR2M7Q8NG81 312 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 OR5M9Q8NGP3 310 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 PTPMT1Q8WUK0 201 aaPredicted RBP9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 RND1Q92730 232 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 RASL10BQ96S79 203 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 SERINC2Q96SA4 455 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 MCMBPQ9BTE3 642 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 OR8D2Q9GZM6 311 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 TP63Q9H3D4 680 aaPredicted RBP9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 KCNF1Q9H3M0 494 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 COPS7BQ9H9Q2 264 aaPredicted RBP9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 MCCC2Q9HCC0 563 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 PRDM7Q9NQW5 492 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 DNAJC11Q9NVH1 559 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 GPRC5BQ9NZH0 403 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 MYOTQ9UBF9 498 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 DAPP1Q9UN19 280 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 MRPS33Q9Y291 106 aaKnown RBP9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 SNX24Q9Y343 169 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 LIPGQ9Y5X9 500 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 CLCA3PQ9Y6N3 262 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 ARHGAP21Q5T5U3 1957 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 MPDZO75970 2070 aa9.09□□□□□ -0.95
NIFKP1-201ENST00000398317 EFCAB8A8MWE9 144 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 C17orf105B2RV13 164 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 E7ESA3 106 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 RTCAO00442 366 aaKnown RBP9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 NDUFB5O43674 189 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 ZNF354AO60765 605 aaPredicted RBP9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 STK16O75716 305 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 ALX3O95076 343 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 TNNI3P19429 210 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 CAPN3P20807 821 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 GSTM2P28161 218 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 SSTR1P30872 391 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 GGT5P36269 586 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 HK2P52789 917 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 NUP107P57740 925 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 POU4F1Q01851 419 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 TFF3Q07654 80 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 STX4Q12846 297 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 TESK1Q15569 626 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 GXYLT1Q4G148 440 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 SULT1C3Q6IMI6 304 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 ZNF793Q6ZN11 406 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 UBE3DQ7Z6J8 389 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 TCAIMQ8N3R3 496 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 LILRB4Q8NHJ6 448 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 ASB5Q8WWX0 329 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 DAZLQ92904 295 aaKnown RBP9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 EXT2Q93063 718 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 PTCD3Q96EY7 689 aaKnown RBP9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 SCYL1Q96KG9 808 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 RUNDC3BQ96NL0 473 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 MAPKAP1Q9BPZ7 522 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 TREX2Q9BQ50 279 aaPredicted RBP9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 CAPS2Q9BXY5 557 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 TTTY12Q9BZ98 90 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 PITHD1Q9GZP4 211 aaPredicted RBP9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 POPDC3Q9HBV1 291 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 PNPLA3Q9NST1 481 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 NSMCE4AQ9NXX6 385 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 CD274Q9NZQ7 290 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 TNFRSF10DQ9UBN6 386 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 VTI1BQ9UEU0 232 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 VPS13CQ709C8 3753 aa9.08□□□□□ -0.96
NIFKP1-201ENST00000398317 PRRC2AP48634 2157 aaKnown RBP9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 ACOT7O00154 380 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 FANCGO15287 622 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 CCNT2O60583 730 aaKnown RBP9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 TOXO94900 526 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 GLSO94925 669 aaPredicted RBP9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 ETHE1O95571 254 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 TGFB1P01137 390 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 PCNAP12004 261 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 CD1DP15813 335 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 IGFBP2P18065 325 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 EPORP19235 508 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 CNR1P21554 472 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 ATP5A1P25705 553 aaKnown RBP9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 CHRNB4P30926 498 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 MSH2P43246 934 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 MAGEA5P43359 124 aa9.07□□□□□ -0.96
NIFKP1-201ENST00000398317 KCNC1P48547 511 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms