RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 DNAJB6O75190 326 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 BCAS2O75934 225 aaPredicted RBP12.83□□□□□ -0.36
MCF2L-209ENST00000397036 PDE5AO76074 875 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 SLITRK5O94991 958 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 ONECUT2O95948 504 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 CDK4P11802 303 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 PPP2R1BP30154 601 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 GSK3BP49841 420 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 GZMMP51124 257 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 PLIN5Q00G26 463 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 LIPEQ05469 1076 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 ABHD18Q0P651 414 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 IL11RAQ14626 422 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 C1orf146Q5VVC0 180 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 TMEM64Q6YI46 380 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 GLRX5Q86SX6 157 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 PIP4P1Q86T03 277 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 ZNF595Q8IYB9 648 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 GOLM1Q8NBJ4 401 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 AGBL5Q8NDL9 886 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 TNIP2Q8NFZ5 429 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 OR4K14Q8NGD5 310 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 WDR60Q8WVS4 1066 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 UCN3Q969E3 161 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 EXOSC8Q96B26 276 aaKnown RBP12.83□□□□□ -0.36
MCF2L-209ENST00000397036 ZNF583Q96ND8 569 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 BBS4Q96RK4 519 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 NDC1Q9BTX1 674 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 THUMPD3Q9BV44 507 aaKnown RBP12.83□□□□□ -0.36
MCF2L-209ENST00000397036 GLIPR2Q9H4G4 154 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 RAD21L1Q9H4I0 556 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 ALG2Q9H553 416 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 EPS8L2Q9H6S3 715 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 TPT1P8Q9HAU6 139 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 PARD6AQ9NPB6 346 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 IRAK4Q9NWZ3 460 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 ENTPD4Q9Y227 616 aa12.83□□□□□ -0.36
MCF2L-209ENST00000397036 MRPS33Q9Y291 106 aaKnown RBP12.83□□□□□ -0.36
MCF2L-209ENST00000397036 VPS13AQ96RL7 3174 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 C4orf47A7E2U8 309 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 NVLO15381 856 aaKnown RBP12.82□□□□□ -0.36
MCF2L-209ENST00000397036 RDH16O75452 317 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 KRT75O95678 551 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 GPR75O95800 540 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 GSNP06396 782 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 HBQ1P09105 142 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 FGF5P12034 268 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 CSTF2P33240 577 aaKnown RBP eCLIP12.82□□□□□ -0.36
MCF2L-209ENST00000397036 MS4A2Q01362 244 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 FADDQ13158 208 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 GTDC1Q4AE62 458 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 CPZQ66K79 652 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 RHBDD2Q6NTF9 364 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 OR5T3Q8NGG3 340 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 SUN3Q8TAQ9 357 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 JADE3Q92613 823 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 POP5Q969H6 163 aaKnown RBP12.82□□□□□ -0.36
MCF2L-209ENST00000397036 MOAP1Q96BY2 351 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 OR1F2PQ96R84 312 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 SIRT3Q9NTG7 399 aaPredicted RBP12.82□□□□□ -0.36
MCF2L-209ENST00000397036 NTMQ9P121 344 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 ACTR3BQ9P1U1 418 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 RARRES3Q9UL19 164 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 PCDHB3Q9Y5E6 796 aa12.82□□□□□ -0.36
MCF2L-209ENST00000397036 PCNX2A6NKB5 2137 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 A0A1B0GX78 115 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 ZNF860A6NHJ4 632 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 GLOD5A6NK44 160 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 WASHC1A8K0Z3 465 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 CLDN4O14493 209 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 CTNSO60931 367 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 BMP2P12643 396 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 XKP51811 444 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 MTPNP58546 118 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 TXNL4AP83876 142 aaKnown RBP12.81□□□□□ -0.36
MCF2L-209ENST00000397036 DSG2Q14126 1118 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 SELPLGQ14242 412 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 KPNB1Q14974 876 aaKnown RBP12.81□□□□□ -0.36
MCF2L-209ENST00000397036 AASDHQ4L235 1098 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-209ENST00000397036 BHLHB9Q6PI77 547 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 DNAJC14Q6Y2X3 702 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-209ENST00000397036 PROSER1Q86XN7 944 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 OR52E4Q8NGH9 312 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 OR52N2Q8NGI0 321 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 SFXN5Q8TD22 340 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 NEURL3Q96EH8 262 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 MMABQ96EY8 250 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-209ENST00000397036 CSF3RQ99062 836 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 KCTD14Q9BQ13 255 aaPredicted RBP12.81□□□□□ -0.36
MCF2L-209ENST00000397036 IKZF5Q9H5V7 419 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 CXorf36Q9H7Y0 433 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 FBXO8Q9NRD0 319 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 SEMA3GQ9NS98 782 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 C5AR2Q9P296 337 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 MAP4K5Q9Y4K4 846 aa12.81□□□□□ -0.36
MCF2L-209ENST00000397036 RIF1Q5UIP0 2472 aaKnown RBP12.8□□□□□ -0.36
MCF2L-209ENST00000397036 SCN3AQ9NY46 2000 aa12.8□□□□□ -0.36
MCF2L-209ENST00000397036 SYNDIG1LA6NDD5 238 aa12.8□□□□□ -0.36
MCF2L-209ENST00000397036 FAM220BPB1ANY3 271 aa12.8□□□□□ -0.36
MCF2L-209ENST00000397036 B4E171 279 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms