RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ATP5A1P25705 553 aaKnown RBP18.25■□□□□ 0.51
LMNB1-202ENST00000395354 E2F1Q01094 437 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 MLC1Q15049 377 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 PRSS53Q2L4Q9 553 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 FBXO42Q6P3S6 717 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 WDR74Q6RFH5 385 aaPredicted RBP18.25■□□□□ 0.51
LMNB1-202ENST00000395354 ZNF793Q6ZN11 406 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 PTOV1Q86YD1 416 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 OR52N2Q8NGI0 321 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 GAL3ST3Q96A11 431 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 FAM122AQ96E09 287 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 ZDHHC12Q96GR4 267 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 RNF145Q96MT1 663 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 NR1H4Q96RI1 486 aaPredicted RBP18.25■□□□□ 0.51
LMNB1-202ENST00000395354 NUDT22Q9BRQ3 303 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 SLC35A5Q9BS91 424 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 Q9H521 79 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 ACSS1Q9NUB1 689 aaPredicted RBP18.25■□□□□ 0.51
LMNB1-202ENST00000395354 PILRAQ9UKJ1 303 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 RAB26Q9ULW5 256 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 KLHL20Q9Y2M5 609 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 RFPL3O75679 317 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 LDLRP01130 860 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 HOXB3P14651 431 aaPredicted RBP18.25■□□□□ 0.51
LMNB1-202ENST00000395354 MAGP20916 626 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 UQCRC2P22695 453 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 CSF2RBP32927 897 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 PCBP4P57723 403 aaKnown RBP18.25■□□□□ 0.51
LMNB1-202ENST00000395354 VAC14Q08AM6 782 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 FADDQ13158 208 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 FCRL6Q6DN72 434 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 PPP4R4Q6NUP7 873 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 VN1R4Q7Z5H5 301 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 ACOT4Q8N9L9 421 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 FAM110BQ8TC76 370 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 TGM7Q96PF1 710 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 OR2A5Q96R48 311 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 GFM1Q96RP9 751 aaKnown RBP18.25■□□□□ 0.51
LMNB1-202ENST00000395354 SEPHS2Q99611 448 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 BDH2Q9BUT1 245 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 C9orf16Q9BUW7 83 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 NEUROD4Q9HD90 331 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 LYARQ9NX58 379 aaKnown RBP18.25■□□□□ 0.51
LMNB1-202ENST00000395354 TOR4AQ9NXH8 423 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 POMT2Q9UKY4 750 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 SAMD4AQ9UPU9 718 aaKnown RBP18.25■□□□□ 0.51
LMNB1-202ENST00000395354 PCDHGA1Q9Y5H4 931 aa18.25■□□□□ 0.51
LMNB1-202ENST00000395354 A0A0J9YY10 115 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 SPAARA0A1B0GVQ0 90 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 URADA6NGE7 173 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 NTN3O00634 580 aaPredicted RBP18.24■□□□□ 0.51
LMNB1-202ENST00000395354 SLC35G6P0C7Q6 338 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 CEACAM1P13688 526 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 GFERP55789 205 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 RBBP4Q09028 425 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 SLAMF1Q13291 335 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 ADRM1Q16186 407 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 CLPPQ16740 277 aaPredicted RBP18.24■□□□□ 0.51
LMNB1-202ENST00000395354 RSPO4Q2I0M5 234 aaPredicted RBP18.24■□□□□ 0.51
LMNB1-202ENST00000395354 TMTC4Q5T4D3 741 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 TMEM71Q6P5X7 295 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 FAM92BQ6ZTR7 304 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 TRIM73Q86UV7 250 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 MMP21Q8N119 569 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 ZBED6CLQ96FA7 236 aaPredicted RBP18.24■□□□□ 0.51
LMNB1-202ENST00000395354 DPYSL5Q9BPU6 564 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 TRIM4Q9C037 500 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 COQ10BQ9H8M1 238 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 TEX10Q9NXF1 929 aaPredicted RBP18.24■□□□□ 0.51
LMNB1-202ENST00000395354 RPS6KA6Q9UK32 745 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 ASB4Q9Y574 426 aa18.24■□□□□ 0.51
LMNB1-202ENST00000395354 DENRO43583 198 aaKnown RBP18.23■□□□□ 0.51
LMNB1-202ENST00000395354 TPST1O60507 370 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 DEAF1O75398 565 aaPredicted RBP18.23■□□□□ 0.51
LMNB1-202ENST00000395354 PRSS23O95084 383 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 SERPINA1P01009 418 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 C9P02748 559 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 PCGF2P35227 344 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 ALDH9A1P49189 494 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 MVDP53602 400 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 SIM1P81133 766 aaPredicted RBP18.23■□□□□ 0.51
LMNB1-202ENST00000395354 SPIDRQ14159 915 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 MANEAQ5SRI9 462 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 NDUFAF5Q5TEU4 345 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 ZNF574Q6ZN55 896 aaPredicted RBP18.23■□□□□ 0.51
LMNB1-202ENST00000395354 ZBTB49Q6ZSB9 765 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 SLCO6A1Q86UG4 719 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 AMER3Q8N944 861 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 CAMKVQ8NCB2 501 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 FBXO30Q8TB52 745 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 SLC47A1Q96FL8 570 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 ZNF597Q96LX8 424 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 ZFYVE21Q9BQ24 234 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 NLNQ9BYT8 704 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 TMEM9Q9P0T7 183 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 KLHL3Q9UH77 587 aa18.23■□□□□ 0.51
LMNB1-202ENST00000395354 SNRNP200O75643 2136 aaKnown RBP18.22■□□□□ 0.51
LMNB1-202ENST00000395354 C4orf51C9J302 202 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 CLOCKO15516 846 aa18.22■□□□□ 0.51
LMNB1-202ENST00000395354 KIF1CO43896 1103 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms